| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0545 |
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| Symbol | dcd |
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| ID | 7388951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 464200 |
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| End bp | 465276 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650179 |
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| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
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| Protein accession | YP_002548392 |
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| Protein GI | 222147435 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGATC GCGCCATAGG CGAATTGTTC GGCTTGGCCT CGCTTTTGAG CGAAACCATG
CTCGATCACG ACCAGATCCA GCCGGCGAGT CTTGATCTGA GGTTGGGCTC CAAAGCGCTC
AGGGTGCGCG CCAGCTTTAT GCCGGGCCCC AACAGCACGG TGGCGGACAA GCTGCAACGG
TTGACCCTGC ATGAGATCGA TCTGGAGCAT GGCGCTGTCC TTGAAACCGG CTGTGTCTAT
ATCGTGCCGC TGATGGAGAG CCTGGATTTG CCGGCGGATC TATCTGCCTC CACCAATCCG
AAAAGCTCGA CCGGCCGCCT CGACATCTTT ACGCGGGTGA TGGTCGATTA CGCGCAGGAA
TTCGACAAGA TTCCGGCAGG CTACAAGGGC CAGCTTTATC TGGAAATCAG TCCGCGGACG
TTTCCCATCA TCGTGCGGCG CGGCTCTCGC CTGTCGCAGA TCCGCTTCCG GATCGGCCAT
GCGCTTCTGA GCGACAGCGA ACTTCTGGAT CTGCACAAGG CCGAAACGCT GGTGGCCAGC
GAGACGCCCA ATGTCTCGGG TGGCGGCATC GCGCTGTCCA TCGATCTGAA GGGGACGGGA
CCGGACGGGC TGGTCGGTTA TCGCGGCAAG CATCATACGG CGGTGATCGA CGTCGATCGT
AAGGCTGCCC ATGATGTGCT GGACTTCTGG GAACCGCTCT ACAGCCGTGG CCGTGACGAA
TTAATCCTCG ATCCCGACGA GTTCTACATT CTCGTCTCAC GCGAGGCCGT CCATGTCCCG
CCGCTCTATG CGGCGGAAAT GACTCCGTAC GACCCGCTGG TCGGGGAGTT CCGCGTTCAT
TACGCCGGCT TTTTCGATCC GGGCTTCGGC CATGCCGGGG CTGGCGGTAC CGGCAGCCGC
GCTGTGCTGG AAGTGCGCAG CCACGAAGTA CCCTATATTC TAGAGCACGG CCAGATCATC
GGCCGCCTGG TCTATGAACA TATGCTCGAA CATCCCCAGG GTCTCTACGG CACAGGCCTC
GGCTCCAATT ACCAGGCTCA GGGACTGAAG CTCTCCAAGC ATTTTCGCGC AGCCTGA
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| Protein sequence | MADRAIGELF GLASLLSETM LDHDQIQPAS LDLRLGSKAL RVRASFMPGP NSTVADKLQR
LTLHEIDLEH GAVLETGCVY IVPLMESLDL PADLSASTNP KSSTGRLDIF TRVMVDYAQE
FDKIPAGYKG QLYLEISPRT FPIIVRRGSR LSQIRFRIGH ALLSDSELLD LHKAETLVAS
ETPNVSGGGI ALSIDLKGTG PDGLVGYRGK HHTAVIDVDR KAAHDVLDFW EPLYSRGRDE
LILDPDEFYI LVSREAVHVP PLYAAEMTPY DPLVGEFRVH YAGFFDPGFG HAGAGGTGSR
AVLEVRSHEV PYILEHGQII GRLVYEHMLE HPQGLYGTGL GSNYQAQGLK LSKHFRAA
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