| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0522 |
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| Symbol | |
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| ID | 7388933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 443179 |
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| End bp | 445434 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643650161 |
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| Product | two component sensor kinase/response regulator hybrid |
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| Protein accession | YP_002548374 |
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| Protein GI | 222147417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTCG CTCCCGCCAC GGCGCAAAAA CGTCAAACGC AGCCAAAGAC GACAATGATC
CTGTTGATCC TGTCGGGTGT CTTGCTGCTG ACATTTCTTC TGCTGTTCAA GGACGTATCG
GATCGCTACC GCCTGCTGTT TGACGATATC CGGGAAAACG CAGTCTGGTC GATCTACCAA
TTGGACCGGG AAGCGCGCGC CCTCGATTAT GTCCTGGTGG AAGCCAGCAA CCAGGGTGCC
AGCGACGAGA AGGCAATCGC GCAAGTGTCT ATGCGCTACG ATATCCTCCT GTCCCGGATC
AACCTGGTCA ATGACTCCAA ATTCGGTAGC TATTTCAACA GTGACACGAC GATATCAGGC
CATTTGCAAA GCATCGGCGA CATCATCCGG AAAATACAAC CGGTTTTGGA TGGATTTCAA
ACTGGCGTCG TACCGGACAC TCAACAGATT GAAGAGGTGA AGCGGGACCT GGATGTCTTG
TGCGCGCAAA CCAACGACCT GTTGATCTAC ACCAATTCCT ACGTTGGCAA CCAACGCTCC
ACCATCCGCA GCGCCATGTT CGAGATGGAA AAGACCTCGG CCATTATGCT CGGTCTGTTG
ATGGCGTCGG TAATCTTTCT CGTCGTCACG TTACACCGCC AGCTCAAGTC GGTCCGCGAG
ACCAGTCGCC GCCTGGAAAC CATGACCAGG GAACTATCGG ATGCTTACGA GGCCGCCGAT
TCCGGCAATC GGGCCAAATC TCAGTTCATG GCCACCATGG GCCACGAAAT TCGTACACCG
CTCAACGCCA TCCTGGGCAT GGCCGAATTG CTGGAATATT CACAGCTGCC GTCTGATGCC
CTGCAAAGCG TCAAGACCAT CCGCTCGTCT GGCGAAGCGC TGCTGGAAGT GATCAACGAG
ATCCTGGATT ACTCGAAGAT CGAGCATGGC AAGCTGGAGC TGGAAGAACG CGCCGTCGAT
ATTTCCAGCC TGGCTGAAAA TACCATCAGC ATCATGCAGG GCCGCTCCGA CGATCAGGAC
AACCAGCTGG TGCTGGATAT TCCGGTGTCT CTCGATGCGC TCTACGTGCG CACCGATCCC
ACCCGCCTGC GCCAGGTTCT ACTCAATCTG CTCAGCAATG CCATCAAATT CACCCAGAAC
GGCGTGGTGA CACTGCGGCT GCGCGAATTC TATCGCGGCA GCGCGTTGAT GTTGCGGTTT
GAGGTGGAAG ATACCGGCAT CGGCATCGAC GAGACTGGGC TTGCCAAATT GTTCAAGCCA
TTTTCGCAGG TCGATGCCAG CATTAGCCGC AAATATGGTG GTACCGGGCT TGGGCTGACA
ATCTGCAAGC AGATTGTCGA GAAGCTTGGC GGCGAACTGG GCATGAGCAG CACGGTTGGG
GTCGGCAGCA TCTTCTGGTT TGAACTGCCG GTCATGGCAG CAGGAAAGGA CGATGTCCGC
CAGAATGCCC GCCACAGCAG CGCGGATTTG CCCCGTCTGA AGATCCTTCT GGTGGAGGAT
AACCGGGTCA ACCAGCAGGT TGCCAGCCGT TTCCTGTCGA AACTCGGTCA GGATGTGGTT
GTGGCTGGCG ATGGTGCCCA GGCGGTCGCC CGCACCGAGC GGGAAGTCTT CGACATGATC
CTGATGGATA TGCAAATGCC GGTCATGGAC GGTATCGAGG CAACCCGTCA TATCATCGAG
CGCGGCGGGG CTTCCGCCTT GACGCCGATT GTTGCCATGA CCGCAAATGC TTCTGACGAC
GATCGCCGTC GGTGCCGCGC TGCCGGCATG GTGGGATTTG AATCCAAACC CGTGACCATG
AACCGCCTGC GCGACCTCAT TCTGAGTTTT GCACCGGTGG ACCGCGAACA GGTCTCGGGT
GAGGAGCCGG TTGAGACCAA GCCTCAGCAA GACAGTGTGT TGGACCATAG CCCACTGACG
CTGCAACAGC ATCTTGACGA GATTAACGGG CTTGATGAAG CCCGTCATGA CGAACTGGTC
GAGGCTCTGG GCGAAGAGAT CTACCAGGAA CTGATTGAAT CGTTCTTTGA CGATGCCGCC
CAGCTGCTTG GCGAATTGCA CAATGCCATG GCCCAGCGCA ATCCCCGCGA AATCGATCGC
GTGCTCCACA CGATCAAGGG GGCTGCCGTC AATGTTGGTT TGAACGATAT TGCAGGCTTT
GCCCATGCGT TAAGAGTGCA GCAGCCAACG CCGGATGCCG TTCACAGGTT GACGCAAGAG
GTGGATTTGA TGAAGCTCAA ACTGGTAGGA GCCTGA
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| Protein sequence | MLLAPATAQK RQTQPKTTMI LLILSGVLLL TFLLLFKDVS DRYRLLFDDI RENAVWSIYQ
LDREARALDY VLVEASNQGA SDEKAIAQVS MRYDILLSRI NLVNDSKFGS YFNSDTTISG
HLQSIGDIIR KIQPVLDGFQ TGVVPDTQQI EEVKRDLDVL CAQTNDLLIY TNSYVGNQRS
TIRSAMFEME KTSAIMLGLL MASVIFLVVT LHRQLKSVRE TSRRLETMTR ELSDAYEAAD
SGNRAKSQFM ATMGHEIRTP LNAILGMAEL LEYSQLPSDA LQSVKTIRSS GEALLEVINE
ILDYSKIEHG KLELEERAVD ISSLAENTIS IMQGRSDDQD NQLVLDIPVS LDALYVRTDP
TRLRQVLLNL LSNAIKFTQN GVVTLRLREF YRGSALMLRF EVEDTGIGID ETGLAKLFKP
FSQVDASISR KYGGTGLGLT ICKQIVEKLG GELGMSSTVG VGSIFWFELP VMAAGKDDVR
QNARHSSADL PRLKILLVED NRVNQQVASR FLSKLGQDVV VAGDGAQAVA RTEREVFDMI
LMDMQMPVMD GIEATRHIIE RGGASALTPI VAMTANASDD DRRRCRAAGM VGFESKPVTM
NRLRDLILSF APVDREQVSG EEPVETKPQQ DSVLDHSPLT LQQHLDEING LDEARHDELV
EALGEEIYQE LIESFFDDAA QLLGELHNAM AQRNPREIDR VLHTIKGAAV NVGLNDIAGF
AHALRVQQPT PDAVHRLTQE VDLMKLKLVG A
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