Gene Avi_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0521 
Symbol 
ID7388932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp442685 
End bp443179 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID643650160 
Producthypothetical protein 
Protein accessionYP_002548373 
Protein GI222147416 
COG category[S] Function unknown 
COG ID[COG3915] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAT ATGTCCTCGC CATCGCCCTG CTTTTTGCCT TGGCACCGCG CGCCGAGGCT 
CTCGACAAGC CCAAGGGTGC CGTCATCCTG ACTGTCGAAG GCAAGCTTTC CCACTCCAAT
AGCGGCGACA AGGCCATTTT CGATCTCGCC ATGCTGGACG CCTTGCCAGG ACGGACCGTG
ACGCTTGAGA CCCCATGGAC GAAAAAGCCT GCCACCTATT CCGGCCCCTT GCTGCGCGCT
GTTCTGGATG CCGCAGGCGC TGGACGGGGA GCTGTCACGG TACGGGCGCT CAATGACTAT
TCGGCAGTCA TTCCGCCAGA GGATGTAACC GGGCTCAACA TTATCCTTGC CACACGCATG
GACGGCGAAA CCATGCCGGT GCGCGACAAG GGCCCGATGA TGGTGATCTA TCCGTTCGAC
GAGGACAGCA GTCTCTATAC GGAAACCTAT TTCGCGCGCT CCGTTTGGCA GATCAAATCG
CTCGAGGTTC GGTGA
 
Protein sequence
MKGYVLAIAL LFALAPRAEA LDKPKGAVIL TVEGKLSHSN SGDKAIFDLA MLDALPGRTV 
TLETPWTKKP ATYSGPLLRA VLDAAGAGRG AVTVRALNDY SAVIPPEDVT GLNIILATRM
DGETMPVRDK GPMMVIYPFD EDSSLYTETY FARSVWQIKS LEVR