| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0520 |
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| Symbol | pleD |
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| ID | 7388931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 442287 |
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| End bp | 442688 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650159 |
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| Product | two component response regulator |
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| Protein accession | YP_002548372 |
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| Protein GI | 222147415 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATTC TGATCGTTGA AGACAATGCC ACCAACGCGA TGATCCTGAA ACATCTGGCA
CGCAAGGTCG CCGATGATGA AATCATCGTG CAGGCCGATG CCAATGAGGC GCTGGTTCTG
TGTCACCAAA CGCTATTCGA TCTGTTGATC GTCGATCAGA TCCTGCCGGG TATGAGCGGT
TTGCAATTTG TCACCACGCT CCGCCAGCTC GGCCGTTATG ACCAGGTGCC GATCATTATG
GTTACCGCCG ACAATGAACC GGGACTGCGC CAGGCCGCCC GTCAGGTCGG CATTACCGAC
TTTTTGACCA AGCCGGTTGA AGCCCTGGCC TTCCGCCAGT TGATCGCCAA TTACCGTGGC
GGCAGCGTTG CGGGTGAAGC GCGGGGCGCT GTGGTCCGAT GA
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| Protein sequence | MSILIVEDNA TNAMILKHLA RKVADDEIIV QADANEALVL CHQTLFDLLI VDQILPGMSG
LQFVTTLRQL GRYDQVPIIM VTADNEPGLR QAARQVGITD FLTKPVEALA FRQLIANYRG
GSVAGEARGA VVR
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