| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0510 |
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| Symbol | |
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| ID | 7388504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 431889 |
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| End bp | 432407 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650150 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002548363 |
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| Protein GI | 222147406 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCATT CTTCAGAAAA CCCCTCACCC GGCGGGTGGG GGTGGTTGAA GCGCATCTTC
GAGTTTGCGG GTGTGCTGGC CTTCATCATC ATGTTCGGAT CAACCCTGCT TGGCGTGATT
GCTCGCTATT TCGGTTTGGG CGGGTTCGAA TGGTCTTTCG AAGTCGCAGG GATCGCTTTC
ATCTGGATCA TCTTCATCGG GTTGATCAAT GCCGAAGTGC GCGGTGAAAA CGTGGCTTTC
GAAGCCTTCA AGCACAGCGC CCCGCCCCGT CTGCGGGCCG CCTTCGATGC CATCGCCAAT
CTGGCGCTGC TGACCATGGG ACTGGCTTTC GTCATCAGCG GCTGGGCGGT CTGGCAGCGT
TCTTGGAAGG TGCCGACATC CGTCTTGCGC ATGCCGACCG GCGTGATCAC GGCGACCATC
CTCATTCTTG GCGTCGCAGC CGTCTGCATT GCGCTCTACC GCCTTTCCCA CAGGGTTCGT
CCCCTACCCG GAAAGCCACA GGAAGGATCA CTGCGATGA
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| Protein sequence | MDHSSENPSP GGWGWLKRIF EFAGVLAFII MFGSTLLGVI ARYFGLGGFE WSFEVAGIAF
IWIIFIGLIN AEVRGENVAF EAFKHSAPPR LRAAFDAIAN LALLTMGLAF VISGWAVWQR
SWKVPTSVLR MPTGVITATI LILGVAAVCI ALYRLSHRVR PLPGKPQEGS LR
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