Gene Avi_0450 details

Gene Information

• Locus tag: Avi_0450
• ID: 7388461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 383909
• End bp: 384709
• Gene Length: 801 bp
• Protein Length: 266 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643650105
• Product: hypothetical protein
• Protein accession: YP_002548320
• Protein GI: 222147363

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGCGA AGAAAACGAC CATTGCGGCC CTGGCGGCTA CCCTGCTGGT CAGCGCGTCA 
TCCGGTGCCG TATTTGCAAA AGACGGTAAG GCTCCACCTC CACCTCCACC GCCGCCACGG 
CCTGAAGAGA TGCGCGACGC CTGCGGTCCA CGGCCGATGA TGATGCGTGG ACCGGCAGCG 
ATGTTCATCT TTGCCCTCCA GCAATTCGAC ACCAACAAGG ACGGTAAGAT TTCGAAGGAA 
GAGGCCAAGG CTGCTGAAGA CAAGCTGTTT ACGGCCATCG ATACCGACAA GGACGGCGTT 
CTGACGCCAG GTGAACTGCG CAAGTTCCAT GAAGCACGCA TGGAGGCCAT GCGTGCCGAC 
ATGCCGAAGG CTCCGGGGCC TGAGGGTGCC GCGCCAGCCG ATCCTAATGG GCCAAAGCCT 
GACGAGGCGA CGGATCAGCC ACCACCGCCG CCGCCAGGTG GCCTGGGTGC TGAAGACGAC 
GCCATGGGAC CGCCTGATGA CGGCATGGCC GGTTGTGGTC CGCATCGTCC AGGGCCTGAA 
CGTTGGGCGA AGGAACGCGG TCCTGAGGGC GAGCGAATGG GTGGTCCTCA TGGCCATCGC 
CCGATGATGG CGATGGGGCC AATGGGTGGT CCAATGGGTG CGATGCGCCT GCTGGAGAAG 
GTCGACACCG ATGAAAACGG CCAGATCAGT AAGGCCGAAG CCGATGCGGC GCTCGATAAG 
CTGTTCACCC GTCTGGATAC CAATAAGGAT GGGTTCATTT CGGCCGATGA CTTCCCGAAG 
GGCCCGTCGC TGCTGCCATG A 

 

Protein sequence

MSAKKTTIAA LAATLLVSAS SGAVFAKDGK APPPPPPPPR PEEMRDACGP RPMMMRGPAA 
MFIFALQQFD TNKDGKISKE EAKAAEDKLF TAIDTDKDGV LTPGELRKFH EARMEAMRAD 
MPKAPGPEGA APADPNGPKP DEATDQPPPP PPGGLGAEDD AMGPPDDGMA GCGPHRPGPE 
RWAKERGPEG ERMGGPHGHR PMMAMGPMGG PMGAMRLLEK VDTDENGQIS KAEADAALDK 
LFTRLDTNKD GFISADDFPK GPSLLP