| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0443 |
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| Symbol | |
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| ID | 7388454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 378110 |
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| End bp | 378532 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643650098 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002548313 |
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| Protein GI | 222147356 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000554716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCGAAA ACAAAAAGAA GCCTAACCCC ATCGACATTC ATGTCGGTAG CCGGATTCGT
CTTCGCCGCA CCATGCTCGG AATGAGCCAG GAAAAGCTGG GCGAAAGCCT CGGCATTACG
TTTCAACAAA TTCAGAAGTA CGAAAAAGGC ACAAATCGTG TCGGCGCCAG CCGCTTGCAG
AATATTTCAA GCATTCTGAA TGTACCCGTC TCGTTCTTTT TCGAGGATGC ACCGGGTGAG
CAGGTTGTAG CAGGCGCCAA TGGCTTTTCC GAGGCGGCCA GTTCCAACTA TGTCGTCGAC
TTCCTCTCGT CTTCCGAAGG CCTGCAGCTG AACCGCGCTT TCGTAAAGAT CAACGATCCG
AAAGTGCGCC GTAAAGTCGT CGATCTGGTC AAGGCGCTTG CCGCCGACGC AGACGCGGAA
TAA
|
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| Protein sequence | MLENKKKPNP IDIHVGSRIR LRRTMLGMSQ EKLGESLGIT FQQIQKYEKG TNRVGASRLQ
NISSILNVPV SFFFEDAPGE QVVAGANGFS EAASSNYVVD FLSSSEGLQL NRAFVKINDP
KVRRKVVDLV KALAADADAE
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