| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0369 |
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| Symbol | prfC |
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| ID | 7387813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 316434 |
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| End bp | 318017 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650039 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002548254 |
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| Protein GI | 222147297 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAA CGCTCGCAGA GGCGGTCTCC CGCCGCCGCA CCTTCGCTAT TATCGCTCAC
CCGGATGCTG GTAAAACCAC GCTGACCGAA AAGCTGCTGC TGTTCGGCGG CGCGATCCAG
CTGGCCGGTG AGGTGAAAGC CAAGAAAGAC CGGATACAGA CCCGTTCGGA CTGGATGAAG
ATCGAGCGTG AGCGCGGCAT TTCCGTCGTC ACCTCGGTGA TGACCTTCGA ATATGAGGGC
AATGTCTTCA ATATTCTCGA TACGCCCGGC CATGAAGATT TCGCCGACGA TACGTATCGC
ACGCTGACGG CGGTGGATGC TGCCGTCATG GTCATCGATG CTGCCAAGGG TATCGAGCCG
CGCACGCTGA AATTGTTCGA AGTCTGCCGG ATGCGCGATA TTCCGATCAT CACCTTCGTC
AACAAGATGG ACCGTGAAAG CCGGGATATT TTCGAGGTTC TGGATGAAGT AGAAGAAAAG
CTGGCGCTGG ACACCGCCCC GATTACCTGG CCGGTCGGTC GGTCGAAAAG CTTCTGCGGC
TCCTATAATC TGGTCGATAA CACCTTCCGT GGTTCCGACA AGCAGGTCGA GGCTTTGCCG
GTCAACAGCC CGAAGAATGT CGCGGAAAAC CTGCCGGAAA ACGAGCGTCA GACCTTTATC
GACGAGCTGG AGCTGGCGCA GGAAGCCTGC CGCCCCTTCG ACCGGCAGGC CTTTCTCGAA
GGCCATATGA CCCCGGTGTT CTTCGGTTCG GCGCTCAGAA ATTTTGGCGT GCGCGACCTG
ATCAATGCGC TGGGTGATTT TGCCCCGCCG CCGCGTGACC AGATGGCCGA TATCCGCAAG
GTGCATGCGG CGGAAGACAA GATGACCGCC TTCGTCTTCA AGATCCAGGC CAATATGGAC
CCCAATCACC GCGACCGCAT TGCCTTTGCC CGGATCTGCT CTGGCAAGCT GGAGCGCGGC
ATGAAGGCGC GGCTGGCGCG CACCGGCAAG CTGATGGGCC TGACAGCGCC GCAATTCTTC
TTCGCCTCGC AGCGACAATT GGCCGATACC GCCTTTGCCG GCGACGTGGT GGGCATTCCC
AACCACGGCA CGCTGCGCAT TGGTGATACG CTGACCGAAG GCGAAGCGCT GGTGTTTCAG
GGTGTGCCGA ACTTTTCGCC GGAAATCCTG CGCCGCGTGC GGCTCGAAGA TGCGATGAAG
GCCAAGAAGC TGAAGGAAGC CTTGCAGCAA ATGGCCGAAG AGGGCGTCGT GCAGCTGTTT
TCGCCGGAAG ACGGTTCGCC CGCCATTGTC GGCGTGGTCG GGGCCTTGCA GCTCGATGTG
CTGAAAGAAC GGCTTTCGGG TGAATATACC CTGCCGGTGT CGTTTGAAAT GTCGCGCTTT
TCCGTCTGCC GCTGGATTTC GTCAGATCAA CCCGGCGAAC TCGACAAGTT CATGACGGCG
CGGCGCGGCG ACATCTGCCG GGATCTGGAC GGCGACCCGG TGTTCATGGC GCAGGATGCA
TTTTCGTTGC GCTATGAGGC AGAACGTTAT CCGGCGATCA AGATGGTGGC CATCAAGGAA
TATCACGTCG CCAAGGCGGC GTGA
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| Protein sequence | MAETLAEAVS RRRTFAIIAH PDAGKTTLTE KLLLFGGAIQ LAGEVKAKKD RIQTRSDWMK
IERERGISVV TSVMTFEYEG NVFNILDTPG HEDFADDTYR TLTAVDAAVM VIDAAKGIEP
RTLKLFEVCR MRDIPIITFV NKMDRESRDI FEVLDEVEEK LALDTAPITW PVGRSKSFCG
SYNLVDNTFR GSDKQVEALP VNSPKNVAEN LPENERQTFI DELELAQEAC RPFDRQAFLE
GHMTPVFFGS ALRNFGVRDL INALGDFAPP PRDQMADIRK VHAAEDKMTA FVFKIQANMD
PNHRDRIAFA RICSGKLERG MKARLARTGK LMGLTAPQFF FASQRQLADT AFAGDVVGIP
NHGTLRIGDT LTEGEALVFQ GVPNFSPEIL RRVRLEDAMK AKKLKEALQQ MAEEGVVQLF
SPEDGSPAIV GVVGALQLDV LKERLSGEYT LPVSFEMSRF SVCRWISSDQ PGELDKFMTA
RRGDICRDLD GDPVFMAQDA FSLRYEAERY PAIKMVAIKE YHVAKAA
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