| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0336 |
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| Symbol | sun |
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| ID | 7387786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 289738 |
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| End bp | 291024 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650012 |
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| Product | Sun protein |
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| Protein accession | YP_002548227 |
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| Protein GI | 222147270 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTGG GCGGACGGCT AGCCGGGGCA ATAGAAGTTC TGAGCGATAT CGAGACACGC
CGCAGGCCAG TGGCCGACGC CCTGAAGGAT TGGGGCCTGG CGCATCGCTT CGCCGGATCC
GGTGATCGCG CCGCCATAGG CAATATCGTC TATGACGCCT TGCGCATGAA GCTTTCCCAC
GCCTATATCA TGGATGACGA CAGCCCTGCC GCCCTCGGCT ATGCCGTATT GCTGCGGCAA
TGGGGAATGG CCCCCGAAAG CCTTGCAGCG GACCTTGATG GCGACAGCTT TGCTCCGGCA
CCGTTGACGC AGGCACAGTC GGCAGCCTTT TCCAGCCGAA CGCTGGAGGA CGCACCGCAG
TTTGTCCAGG GTGATATTCC TGAATGGGTG GTTCCATCCT TCGAAGCCGT GTTCGGAGCC
GACTGGCTGC GCGAGGCGCA GGCGCTGGCC GTGCGTCCCA GCCTCGATCT GCGCGCCAAC
ACGCTGAAGG CCAATCGCGA CAAGGTCCTC AAGGCGCTGT CGCATACGCA GGCAAGACCT
GCCACCATTT CTCCCATCGG CATCCGCATT GAGCCGGGTG AAGGCCCGTC GCGCCTGCCG
AATGTCACCG CCGAGCTTGG CTTCCAGAAG GGCTGGTTCG AGGTTCAGGA CGAAGGATCG
CAGATCGTCT CGGCGCTGGT CGAACCGGGA GAAGGTCACC AGGTGCTGGA TTTCTGTGCA
GGCGGCGGTG GCAAGACGCT GGCCATGGCA GCCGCCATGG GCAACAAGGG CCAGGTGCAT
GCCTATGATA GCGACCGCAA GCGGCTGGCG CCGATCATCG AGCGGCTGAA ACGGGCAGGC
ACACATAATA TCCAGGTCCA TGACCGGGTT GCCGCCCTGC AATCTTTGAC TGGACGGTTC
GACAAGGTCT TGGTCGATGC CCCCTGCACC GGCACCGGCA CCTGGCGTCG CAGGCCCGAC
ACCAAATGGC GGCTAACCGA CCGCAATTTG CAGGAGCGGA TCGAACAGCA GCAACAAGCG
CTGACTGAGG CTGCTACCTA TGTCCGGTCC GGCGGCGAGC TGATCTACGT CACCTGCTCG
GTGCTGCCAG AGGAAAATGA CCGGCAGATC GAAGCCTTCA CCGCCGCCCA TCCGCAATTT
TCGCCGATGC CGATGCTGGA GCGCTGGACG GGGCTGTTTG GTGGTTCAGT CGCCAAGCCC
ATCTCCGCCC ATGGCAAAAG CCTGACCTTG AGCCCTGCTG CAACCGATAC CGACGGATTT
TTCTTCTGCC GGATGGTCAA AGCCTGA
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| Protein sequence | MRLGGRLAGA IEVLSDIETR RRPVADALKD WGLAHRFAGS GDRAAIGNIV YDALRMKLSH
AYIMDDDSPA ALGYAVLLRQ WGMAPESLAA DLDGDSFAPA PLTQAQSAAF SSRTLEDAPQ
FVQGDIPEWV VPSFEAVFGA DWLREAQALA VRPSLDLRAN TLKANRDKVL KALSHTQARP
ATISPIGIRI EPGEGPSRLP NVTAELGFQK GWFEVQDEGS QIVSALVEPG EGHQVLDFCA
GGGGKTLAMA AAMGNKGQVH AYDSDRKRLA PIIERLKRAG THNIQVHDRV AALQSLTGRF
DKVLVDAPCT GTGTWRRRPD TKWRLTDRNL QERIEQQQQA LTEAATYVRS GGELIYVTCS
VLPEENDRQI EAFTAAHPQF SPMPMLERWT GLFGGSVAKP ISAHGKSLTL SPAATDTDGF
FFCRMVKA
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