| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0321 |
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| Symbol | oxyR |
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| ID | 7387775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 277878 |
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| End bp | 278762 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650001 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002548216 |
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| Protein GI | 222147259 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.916325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGATC TGAATTTTAA TCATCTCCGC TATTTCTGGG CGGTCGCGCA TGAAGGCAGC
CTGACGCGGG CCGCACAGCA TATGAACCTG TCGCAGTCAG CTTTGTCTGT GCAGATCCAG
AAGCTCGAAC ACCAGATGGG TCATGCGCTG TTTGAGCGCG TCGGCAAGAA GCTCGTGCTG
ACAGAGGCCG GACAGATCGC GCTGGATTAT GCCGATACGG TGTTCAAGGC CGGTGACGAA
TTGATGAGCA CGCTCAGTGG CCGCCCGACC GCCAGCCGCC AAGTGCTGCG GGTCGGGGCG
CTGACGACTC TGTCGCGCAA CTTTCAGCTG GAATTCCTGC GCCCGCTGGT CGGTCGCTCC
GACGTGGAAC TGATTGTGCG TTCCGGCAAT ATGCGCGATC TCCTGGCTCA ACTCGAAGCC
CATGCCGTCG ATGTGGTGCT GGCAAACAGC GCTGCCCCGC GTGATGCACG CTCACTGCTG
CGCAATCATC TGCTGAACGA GCAGCCGGTC AGCCTGGTTG GACGCCCCCG GCCTGATGGG
CAGAGTTTTA AATTTCCCGA CGACCTGCGC ACCGAGCCGT TGCTACTGCC CAGCCTCGAC
AGCGATATCC GCGTGGCCTT TGACCGGATT CTCGAAATGG CCGGAATACG ACCCATCATT
CTCGCCGAGG TCGATGATAT GGCGATGCTT CGCCTTCTGG CACGTGAGCG CGAAGGGCTC
ACGCTGGTGC CGCCGATCGT CGTGCGCGAC GAACTGGAGG CGGGAGTGCT CATCGAACAC
TGCCGCATTC CTGAAGTCAT CGAAAGCTTT TATGCAATCA TTCAGAAACG ACGCTTTCCC
AATACGATGC TGGCCGAACT GCTGGCCAGC GGTAGGGTGT TATGA
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| Protein sequence | MRDLNFNHLR YFWAVAHEGS LTRAAQHMNL SQSALSVQIQ KLEHQMGHAL FERVGKKLVL
TEAGQIALDY ADTVFKAGDE LMSTLSGRPT ASRQVLRVGA LTTLSRNFQL EFLRPLVGRS
DVELIVRSGN MRDLLAQLEA HAVDVVLANS AAPRDARSLL RNHLLNEQPV SLVGRPRPDG
QSFKFPDDLR TEPLLLPSLD SDIRVAFDRI LEMAGIRPII LAEVDDMAML RLLAREREGL
TLVPPIVVRD ELEAGVLIEH CRIPEVIESF YAIIQKRRFP NTMLAELLAS GRVL
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