Gene Avi_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0300 
Symbol 
ID7388671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp256094 
End bp256543 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID643649983 
Producttranscriptional regulator MarR family 
Protein accessionYP_002548198 
Protein GI222147241 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTTG ATCGTCGGCA ATCGCCAACC TATCTCGTGA GCCAGCTCGC CAAGGAATTT 
GCCCGTGCCT TACAGGTTCG GGCCGAAGGG CTCGGCTTTT CCGCCGGTCA GTTTCCAATC
CTGCTGGAGC TTTGGGAAGA GCAAGGCCTG ACCCAGAAGC AATTGCTGGA GCGGGTGGCT
GTGGAACAGG CGACCATGGC CAATACCCTG TCTCGCATGG AGCGCGACGG ATTGATCGAG
CGAAAGCCCC ATCCGAGCGA TCGACGTGCG CAACTGGTTT TCCTGACCGC CAAGGGGGAG
GGGTTGCGGG ATCAGGCTAT TTCCGCAGCC TGCGAGGCGG ATGACGCTCT TTTCCATGGG
TTTCGGCGTT TCGAGAAGGA ATTGATGCTG GAATTCATTC GTCAGGCCCT GGAAAATGCC
CGCAGCAGCG ACAAAAGCTC AAATATTTGA
 
Protein sequence
MLFDRRQSPT YLVSQLAKEF ARALQVRAEG LGFSAGQFPI LLELWEEQGL TQKQLLERVA 
VEQATMANTL SRMERDGLIE RKPHPSDRRA QLVFLTAKGE GLRDQAISAA CEADDALFHG
FRRFEKELML EFIRQALENA RSSDKSSNI