| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0292 |
|---|
| Symbol | |
|---|
| ID | 7387587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 247054 |
|---|
| End bp | 248442 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643649977 |
|---|
| Product | leucine aminopeptidase |
|---|
| Protein accession | YP_002548192 |
|---|
| Protein GI | 222147235 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.144461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCCT ATCAATATAT TGAAAGACCC ACCCCGTTTC TGACCAAGGG CGGCAAGTCC
CTGCCGATTT TCGCGGTGAC GCCCGCCCAT ATCGAAACCG GTGCGATTGA TCCTCTTGCG
CTCGATTGGG CGAAGAAGGC AGGCTACAAG GCGGATGTTG GTTCGCTGCT GCTGATCCCC
ACCAGCGATG GACAATTGGG CGGAGCGCTG TTTGGTCTGG GCAGCGCGCC AGGAGAAAAT
CCGTTTCTGG CGGGCAAGCT GGCGCGGGCA TTGCCGGCTG GCGACTGGCA TATCGAGACC
GCACCATTGA CGGCCAACCG GTTGGTTCTG GGCTACGGTC TGGGCAGCTA TCGTTTCGAG
CGCTATAAGG CCGACCGCTC GGATCATCCC AAACTGCTGA TGCCTCAGGA TGCGGATGCC
AGCGACATTG CCCGTCAGCT GGCCGGCGTT TTCCTGGCTC GCGACCTGAT CAACACGCCC
ACCAATGACA TGGGACCGGC AGATCTGGAA AAAACCTTCC GGGCGCTGGC TGACCATTAT
AAGGCAGAGG TCAGCGTGGT GATCGGCGAT GAACTGCTGC ACCGGAATTT TCCTCTGGTT
CACACCGTAG GCCGGGCCAG CGCCCAGGCG CCGAGGCTTC TGGAAATGCG TTGGGGCAAG
AAGGGCCACA AGAAGATCAC CCTGGTCGGC AAGGGAGTTT GTTTTGATAC CGGCGGGTTG
GATATCAAGC CGTCTTCATC CATGTTGCTG ATGAAAAAGG ACATGGGCGG GGCTGCCAAT
GTGCTGGGCC TTGCCCTGAT GATCATGGAT GCCAAGCTGA AAGTGGACCT GCGCGTCATC
GTGCCTGCCG TGGAAAATTC CATAGCCGGC AATGCGTTCC GGCCTGGTGA CATTTATACA
AGCCGTCAGG GCCTGACCGT TCAGATCGAC AATACCGATG CCGAGGGACG GTTGATCCTG
GCCGATGCCC TGACCTATGC CGATGAAGAG GAACCGGATC TGCTGATCGA TATGGCGACG
CTGACGGGGG CTGCCCGTGT GGCGCTCGGT CCGGATGTGC CGGCCTTCTT CTCCAATGAC
GATGCGCTTG CCTATGAGCT GACAGATTCA AGCCTTGAAA CTGACGACCC GATCTGGCGC
CTGCCGCTTT TCCCCGGTTA CGAAAAAATG GTCCGCTCGC AGATTGCCGA CCTCACCAAC
GCACCTGCGG GCGGCATGGC GGGGGCAATC ACCGCTGCCC TGTTCCTGAA GCGCTTTGTC
ACCCGAACGA CAAGCTGGGC GCATTTCGAC ATTTTCGGCT GGGCGTCGCA AGAGCGGCCC
CATAGCCCCG TTGGTGGTGA GGCGCAGGCA ATTCGCGCCC TCTACCGCTA TATCGCCGCG
CTCAAATAA
|
|---|
| Protein sequence | MAPYQYIERP TPFLTKGGKS LPIFAVTPAH IETGAIDPLA LDWAKKAGYK ADVGSLLLIP
TSDGQLGGAL FGLGSAPGEN PFLAGKLARA LPAGDWHIET APLTANRLVL GYGLGSYRFE
RYKADRSDHP KLLMPQDADA SDIARQLAGV FLARDLINTP TNDMGPADLE KTFRALADHY
KAEVSVVIGD ELLHRNFPLV HTVGRASAQA PRLLEMRWGK KGHKKITLVG KGVCFDTGGL
DIKPSSSMLL MKKDMGGAAN VLGLALMIMD AKLKVDLRVI VPAVENSIAG NAFRPGDIYT
SRQGLTVQID NTDAEGRLIL ADALTYADEE EPDLLIDMAT LTGAARVALG PDVPAFFSND
DALAYELTDS SLETDDPIWR LPLFPGYEKM VRSQIADLTN APAGGMAGAI TAALFLKRFV
TRTTSWAHFD IFGWASQERP HSPVGGEAQA IRALYRYIAA LK
|
|---|
| |