Gene Avi_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0289 
SymbolrhtB 
ID7387585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp245245 
End bp245874 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content58% 
IMG OID643649975 
ProductRhtB family transporter 
Protein accessionYP_002548190 
Protein GI222147233 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGT TTGCCCCTTT ATTTGCCATA GCCTTCGCCT TGTTGATTGG CGCGGCCAGT 
CCCGGTCCAA GTTTTCTTTT GGTCAGCCAC ACATCCATGA CCCGCTCCAG AGCCGCCGGT 
TTGGTAACGG CGCTCGGCAT GGGGACCGGC GGGTTGATCT TCGCCGTTCT GGCCCTTGCC 
GGATTGGCTG CCCTGATAAC CCAGTTTGCC TGGCTTCATA GGGTTTTGCA GGTCGCGGGT 
GGCCTCTACC TCGCTTATAT CGCATGGAAA CTCTGGCGGG GTGCGGCCCA ACCGGTCAAT 
ATGGACCAGA CCGGTGTTGC GCCAAAATCT TTCAGCAGGA TTTATCTCAG CGCCTTTTTA 
ACACAGGTCA GCAATCCAAA AACCGCGATT GTCTATGCCA GTATTTTCGC GGCTCTGCTG 
CCACCCCGGC CCGATAGCCT GCTCTTCATC ATGCTGCCAG GCGTGGTCTT TCTGGTGGAA 
GCGGGCTGGT ATTCACTGGT GGCGCTGGTC TTTTCCGCGC CGATACCCCG GCGCGTCTAT 
CTCTCAGCCA AGAAACCGCT GGATCGTCTG GCCGCTTTGG TTCTGGGTGG ACTTGGACTT 
CGCCTTGTGT TCGAGGGCGC GCGGCCCTGA
 
Protein sequence
MTMFAPLFAI AFALLIGAAS PGPSFLLVSH TSMTRSRAAG LVTALGMGTG GLIFAVLALA 
GLAALITQFA WLHRVLQVAG GLYLAYIAWK LWRGAAQPVN MDQTGVAPKS FSRIYLSAFL 
TQVSNPKTAI VYASIFAALL PPRPDSLLFI MLPGVVFLVE AGWYSLVALV FSAPIPRRVY 
LSAKKPLDRL AALVLGGLGL RLVFEGARP