| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0260 |
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| Symbol | |
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| ID | 7387565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 227373 |
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| End bp | 228344 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649955 |
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| Product | ABC transporter membrane spanning protein (sugar/ribonucleotide) |
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| Protein accession | YP_002548170 |
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| Protein GI | 222147213 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATT TCGATATGAT CGTCAGCATC CTGGGCTCCA CGGTGCGTCT GTCGATCCCG
TTGATTTTCA CGGCGCTGGC CGGACTGTTT TCCGAACGGG CTGGGGTTTT CGACATCGGA
TTGGAAGGCA AGATGCTGGC CGGCGCTTTC GCGGCGGCCT GTGTTGCCTA TCTCACCGGG
TCGGCCTGGG CTGGGCTTGC AGGCGGCATT GCGGTGTCCA TCGGCTTTTC GCTGATCCAT
GGCTTTGCCT CGATCACCAA TCGCGGCAAT CAGATCATTT CCGGCGTGGC GCTGAATTTC
GTTGCAGCCG GTTTGACGGC GGTCTTGGGA CAGGCCTGGT TCAGCCAGGG CGGACGCACC
CCGCAGCTGC CGGGTGATGC GCGCTTTCAG CCGATTGTGC TTCCAGGCAC TGATGCCCTG
CGTGACGTGC CTTTTCTCGG TCCTCTCTAT GCCAATGTGG TTTCCGGCAA CAATGCCTTG
ACCTATCTGG CCTTTCTGGC CGTGCCGCTC AGTTGGTGGG TGCTGTATCG CACTCGTTTT
GGCCTCAGGC TGCGGGCCGT GGGCGAAAAT CCCGGTGCGG TCGATACGGC AGGGATTTCC
GTGGCCTGGC TGCGCTACCG GGCGGTGATC GTTGCAGGCT TTCTCTGCGG TTTTGCCGGA
GCCTATCTTG CTATTGCCCA ATCGGCGGCC TTCATCCGCG ATATGTCGGC GGGCAAGGGC
TATATCGCGC TTGCCGCGCT GATCTTTGCC AAGTGGAAGC CGGTGCCTGT GATGTTTGCC
TGCCTGCTGT TCGGCTTTCT CGATGCCATG TCCAATTTCA TGCAGGGCAA GGCGGTGCCG
GGCATTGGTG AAGTGCCAGT ACAGATTTTC CAGGCCCTGC CCTATATTCT CACCTGTATC
CTGCTGGCTG GCTTTATCGG AGCGGCCAAT GGTCCGAAGG CGGGCGGCGT GCCCTATGTG
AAGGAACGGT AA
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| Protein sequence | MDNFDMIVSI LGSTVRLSIP LIFTALAGLF SERAGVFDIG LEGKMLAGAF AAACVAYLTG
SAWAGLAGGI AVSIGFSLIH GFASITNRGN QIISGVALNF VAAGLTAVLG QAWFSQGGRT
PQLPGDARFQ PIVLPGTDAL RDVPFLGPLY ANVVSGNNAL TYLAFLAVPL SWWVLYRTRF
GLRLRAVGEN PGAVDTAGIS VAWLRYRAVI VAGFLCGFAG AYLAIAQSAA FIRDMSAGKG
YIALAALIFA KWKPVPVMFA CLLFGFLDAM SNFMQGKAVP GIGEVPVQIF QALPYILTCI
LLAGFIGAAN GPKAGGVPYV KER
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