Gene Avi_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0184 
Symbol 
ID7387511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp169550 
End bp170185 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content60% 
IMG OID643649898 
Producthypothetical protein 
Protein accessionYP_002548116 
Protein GI222147159 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTC TTCTTTATCT GGATTATGCA GGCGTTGCGC TGTTTGCCGC CACCGGAGCT 
TTGGCCGCCT CACGCAAACA GCTGGATCTG ATCGGCTTCC TGTTTTTTGC CACGGTGACT 
GGCACAGGCG GCGGCACGGT GCGCGATATC ATTCTTGGAC GCCTGCCGGT GTTCTGGGTA 
GTCAACCCAA GCTATATTCT GATCTGCTGC GCTGTTGGCG TGCTGGTGTT CTTCACCGCA 
CATCTGGTGG AATCGCGCTA CAAGCTGCTG ATCTGGCTCG ATGCTATCGG GCTTTCCGCC 
TATTGCGTGA TGGGAGCCGC CAAGGGCATG GCCGCGACAG GCTCGCCCAC CATCGCCATC 
GTCACAGGCA TGATGACGGC CACCTTGGGC GGCGTGTTGC GCGATTTGTT GGCCAATGAG 
CCTTCGGTGC TGCTGCGTCC GGAAATTTAC ATCACCGCAG CCTTGATCGG TGCCTGCGTG 
TTTACCGGGG CTTTCATGCT GGCCGCGCCC TTATACTGGG CATCCGCCGG TGGCGTCCTG 
GCAGCATTTA TGGTGCGCGG CGGCGCACTG TATTTTGGCT GGACATTTCC GCGATATGGG 
CACCAGGCCG GGCGCCATCC TGATGACGTG ATGTGA
 
Protein sequence
MSLLLYLDYA GVALFAATGA LAASRKQLDL IGFLFFATVT GTGGGTVRDI ILGRLPVFWV 
VNPSYILICC AVGVLVFFTA HLVESRYKLL IWLDAIGLSA YCVMGAAKGM AATGSPTIAI 
VTGMMTATLG GVLRDLLANE PSVLLRPEIY ITAALIGACV FTGAFMLAAP LYWASAGGVL 
AAFMVRGGAL YFGWTFPRYG HQAGRHPDDV M