Gene Avi_0156 details

Gene Information

• Locus tag: Avi_0156
• Symbol: recR
• ID: 7388322
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 138537
• End bp: 139142
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643649878
• Product: recombination protein RecR
• Protein accession: YP_002548096
• Protein GI: 222147139
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGC GAGTCACTGG TCCCGAAATC GAAAAACTGA TCCAGCTCCT GGCGAAAGTT 
CCGGGGCTCG GCCCCCGTTC GGCCCGAAGA GCAGCGCTGC ATCTGATCAA GAAGCGCGAG 
CAATTGATGG GGCCGCTGGC GCTGGCCATG GGCGAGGCCC ACGCGAAGGT GAAGATCTGC 
TCCTGTTGCG GCAATGTCGA TACGATTGAT CCCTGCACCG TCTGCACTGA CGAACGGCGC 
GACCAATCGA TGATCATCGT TGTGGAGGAT GTCTCCGATC TCTGGGCGTT GGAACGGGCA 
GGCGCGATGA ATGTCGCCTA TCATGTGCTG GGCGGCACGC TGTCGCCGCT CGATGGCGTC 
GGGCCTGACG ATCTCAACAT CAAGGGCCTG ATCGACCGGG TGGCAAAAGG CGGCGTGCGG 
GAAATCATCA TCGCCGTTAA TGCCACGGTG GAAGGCCAGA CCACGGCCCA TTATATTACC 
GATCACCTGG CCGGGCTAGG AGTGAAAACC ACCCGGCTTG CTCATGGCGT GCCTGTCGGC 
GGCGAACTGG ACTATCTGGA CGAGGGTACG CTCTCGGCGG CGCTTCGTGC CCGCACGCTG 
ATATAG 

 

Protein sequence

MAKRVTGPEI EKLIQLLAKV PGLGPRSARR AALHLIKKRE QLMGPLALAM GEAHAKVKIC 
SCCGNVDTID PCTVCTDERR DQSMIIVVED VSDLWALERA GAMNVAYHVL GGTLSPLDGV 
GPDDLNIKGL IDRVAKGGVR EIIIAVNATV EGQTTAHYIT DHLAGLGVKT TRLAHGVPVG 
GELDYLDEGT LSAALRARTL I