Gene Avi_0154 details

Gene Information

• Locus tag: Avi_0154
• ID: 7388320
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 137126
• End bp: 137698
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643649876
• Product: hypothetical protein
• Protein accession: YP_002548094
• Protein GI: 222147137

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGAGA AACTCATGTC ATCGCTCGCT CAATCATCGC TCGCAAAGCT GTCTGCGGTG 
GCGCTTGTCG CCGCTCTTGC CGTGCCGCTG GCGGCCACGA GCGCCAATGC AGCCGTGCAG 
GTTGGCATGC TCACCTGCGA AATGAGCCCC GGCATCAGTG CGGTCGTCGG CTCCAGCCGC 
GACCTGACCT GCGAATTCAA GCCGACCACA TCGGCACCGG TCGAATATTA TCAGGGTACC 
CTCAGCAAGA TCGGCATCGA CCTGGGCTAT GTGCAGGGCG GCAAAATGGC CTGGGCAGTC 
TATGCGCCGG GTCGTCTGGT GGAAGGCGCC TTGCAGGGTA GCTATGGCGG CACAAGCGCC 
AATGCCGCAG TTGGGTTTGG CGGTGCTGTC AACCTGCTGA TGGGTGGTTT CCAAGGCTCG 
GTTGCCTTGC AGCCTATCGC GCTGGAAAGC ACACTCGGCG TCAATCTCGG AGCGACACTC 
GCCTCGCTGA AGTTGGCCTA TATGCCGCCG TCCACACCAA AGTCGCTGGA TAATGGCCCG 
CCGCTGCGCC ACGGCAAGCA CTACAAGGGC TGA 

 

Protein sequence

MKEKLMSSLA QSSLAKLSAV ALVAALAVPL AATSANAAVQ VGMLTCEMSP GISAVVGSSR 
DLTCEFKPTT SAPVEYYQGT LSKIGIDLGY VQGGKMAWAV YAPGRLVEGA LQGSYGGTSA 
NAAVGFGGAV NLLMGGFQGS VALQPIALES TLGVNLGATL ASLKLAYMPP STPKSLDNGP 
PLRHGKHYKG