| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0024 |
|---|
| Symbol | folC |
|---|
| ID | 7389025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 18355 |
|---|
| End bp | 19767 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643649769 |
|---|
| Product | folylpolyglutamate synthase |
|---|
| Protein accession | YP_002547993 |
|---|
| Protein GI | 222147036 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0285] Folylpolyglutamate synthase |
|---|
| TIGRFAM ID | [TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAG TCGGGAGCAG TTTTACTGCA CCCGGCCCTC AATACGAATT GCAAGCCTGG
AACCGCCCCA TGATAGAGAA TACGCTGAGC CAGGCTGAAC AGGTCATCAA TGAATTGATG
CAGTTGCATC CCAAGGGTTT TGACATGACC CTGGAGCGTA TGCGGCGTTT GCTCGAAGTG
CTGGGCAATC CACAGGACAA GTTGCCGCCG GTCATCCATG TGGCTGGCAC CAATGGCAAA
GGCTCCGTCA GCGCCTTTTC CCGGGCGCTG TTGGAAGCTG GCGGCCTTGC CGTTCATGTC
CACACGTCAC CGCATTTGGT CAATTGGCAC GAGCGTTACC GGATTGGCGT CAAAGGCGGC
AAAGGGCAGA TCGTTGATGA TGGCTCGCTC GCCGATGCCT TGAGACGAGT GGCGGTCGCC
AATGCGGGCC AGCACATCAC CGTCTTTGAA ATTTTGACGG CTGCCGCTTT CCTGCTGTTT
TCTGAAATTC CCGCTGATGC GGTGATTATG GAAGTCGGCA TGGGCGGGCG TCTGGATTGC
ACCAACGTGG TGGATCGGCC CGCCGTCTCC GTCATCATGC CGATTTCTTT TGACCATCAG
GCCTATCTGG GCGACCGGGT GGAGCTGATC GCTGCCGAGA AAGCCGGGAT CATGAAAAGA
CGGCGACCGG TGGTGATCGG CCATCAGGAA TTTGCCGCCG CCCGCGAGGC GCTGGTGGAT
ATTGCTGAGC GATTGGGCTG TCCGCTGTCG GTGTTCGGCC AGGATTATCT GGCATTTGAG
GAGCATGGGC GACTGGTCTA TCAGGATGAA AGCGGCCTGA TGGATCTGCC CCTGCCAAAA
CTTCCGGGCC GCCACCAGTT TGCCAATGCC GCAGCGGCCA TCCGTGCCGT GCGCTCAGCT
GGCTTCACCG TGACCGAAGC CATGGCTGAA ACGGCGATGT ACAGCGTTGA ATGGCCGGGT
CGCCTGCAAA AGCTGACGGA AGGCGCATTG CTGGCCCATG CGCCGAAGGG CGCCGAAATC
TGGGTGGATG GCGGCCATAA TCCCGGTGCC GGTGAAGTGA TCGCCGAGGC GATGGCAGGC
TTTGAAGAAC GCCAATCCCG CCCGCTTTAC CTGATCACCG GCATGCTCAA CACCAAGGAC
CCGCTTGGCT ATTTCAAAGC CTTTGAAGGC CTGGCCATCC AGGCCTTCAC CGTGCCAATC
CGCGGCACCG ACGCTGCCTT GGACCCGGTG GCGCTGGCCA GCTCCGCCTA CGATGCCGGA
ATTCCGGCAG AGCCGGTGTC ATCGGTTGCG GAAGCGCTTG AGGCGATCTG TAGCCGGGTT
AATGCAGAAG AGATTGCGCC GCGAATCCTG ATTGGTGGCT CGCTTTATGT GGTCGGCAAT
GTGCTGTCGG ACAATGGCAC GCCGCCGAGA TAG
|
|---|
| Protein sequence | MPKVGSSFTA PGPQYELQAW NRPMIENTLS QAEQVINELM QLHPKGFDMT LERMRRLLEV
LGNPQDKLPP VIHVAGTNGK GSVSAFSRAL LEAGGLAVHV HTSPHLVNWH ERYRIGVKGG
KGQIVDDGSL ADALRRVAVA NAGQHITVFE ILTAAAFLLF SEIPADAVIM EVGMGGRLDC
TNVVDRPAVS VIMPISFDHQ AYLGDRVELI AAEKAGIMKR RRPVVIGHQE FAAAREALVD
IAERLGCPLS VFGQDYLAFE EHGRLVYQDE SGLMDLPLPK LPGRHQFANA AAAIRAVRSA
GFTVTEAMAE TAMYSVEWPG RLQKLTEGAL LAHAPKGAEI WVDGGHNPGA GEVIAEAMAG
FEERQSRPLY LITGMLNTKD PLGYFKAFEG LAIQAFTVPI RGTDAALDPV ALASSAYDAG
IPAEPVSSVA EALEAICSRV NAEEIAPRIL IGGSLYVVGN VLSDNGTPPR
|
|---|
| |