| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6269 |
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| Symbol | |
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| ID | 7381309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1262810 |
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| End bp | 1263823 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649731 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002547955 |
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| Protein GI | 222107164 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.661725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTGG TATCCGTTGA ACAAACCCCG GCCAAGCGCC GTATTCCCGA CAAGCTCGGC
ACGCCGATAC GCCGCCTGCT GGCCAGCTGG GAAGTGCTGT TATTGGGTGT TGCAGTCGCG
ATTTTCATCG CCAATGCGCT GGCCTCCCCT TATTTTCTGG ACGCCTGGAA CCTGTCGGAC
GCCACCTTCA ATTTCACTGA AAAAGCGATG ATCGCCTTTG CCATGGCGTT GCTGGTGATT
GCCGGTGAGA TCGACCTCTC GGTCGCTGCG ATCATTGCTC TGGCCTCGAC AGCCATGGGC
GCGGCAGCCC AAGTGGGTAT CGGCACGCCT GGCCTGGTGA TGATCGGTAT CGGCGTTGGG
CTTTTATGCG GGGTGTTCAA TGGCGTGCTG GTGGCCGGGC TGAAACTGCC TTCCATCGTC
GTCACCATCG GCACGATGAG CCTGTTTCGC GGCATTTCCT ATATCGTGCT TGGGGATCAG
GCCTATGGAA AATATCCTGA AAGCTTCGCC TATTTCGGCC AGGGCTATGT GGCCTGGGTG
TTTTCCTTCG AATTCGTCCT CTTCCTTGTA CTGGCAGCGC TGTTTGCTGT GCTGCTGCAT
GCCACGAATT TTGGGCGTCA GGTCTATGTG ATCGGGAATA ATCCGCTGGC AGCCAGATTT
TCAGGCATTC CTGTCGATCG GGTCAAATTC ATCCTGTTTC TGCTGACCGG ATTGATGAGC
GGCATTGCCG CCGTTTGCCT GACCTCCCGG CTGGGCTCGA CACGGCCATC GATTGCCCAG
GGTTGGGAGT TGGAAGCCGT CACCATGGTG GTGCTGGGCG GCGTGTCGAT TGTCGGTGGG
GCTGGCACGA TTGGCGGAGT GGTCATTGCC GCCTTCGTCA TGGGTCTGGT GACCTTTGGG
CTGGGGCTGT TGAACGTGCC GGGCATCGTC ATGTCGATCT TCATCGGTCT GCTGCTGATC
ATCACCATCG CCTTGCCGAT TTTGGCGCGA CGGATGCGGG ATATGAGGAC ATGA
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| Protein sequence | MTVVSVEQTP AKRRIPDKLG TPIRRLLASW EVLLLGVAVA IFIANALASP YFLDAWNLSD
ATFNFTEKAM IAFAMALLVI AGEIDLSVAA IIALASTAMG AAAQVGIGTP GLVMIGIGVG
LLCGVFNGVL VAGLKLPSIV VTIGTMSLFR GISYIVLGDQ AYGKYPESFA YFGQGYVAWV
FSFEFVLFLV LAALFAVLLH ATNFGRQVYV IGNNPLAARF SGIPVDRVKF ILFLLTGLMS
GIAAVCLTSR LGSTRPSIAQ GWELEAVTMV VLGGVSIVGG AGTIGGVVIA AFVMGLVTFG
LGLLNVPGIV MSIFIGLLLI ITIALPILAR RMRDMRT
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