| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6257 |
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| Symbol | |
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| ID | 7381298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1248589 |
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| End bp | 1251060 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649720 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547944 |
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| Protein GI | 222107153 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.234906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACA GTCTGCTTGA TGAGATGACC CTTGAGGAAC AGGTTTCCGT GCTATCAGGT
GCGGATTTCT GGACCACTGT GCCGGTGGAG CGGCTCGGTA TTCCAAAGAT CAAGGTGACT
GACGGGCCAA ACGGCGCGCG CGGCGGCGGG TCACTGGTTG GCGGCGTCAA GGCGACATGC
TATCCCGTGG CGATTGCGCT CGGTGCCACC TGGAACCCGG CGCTTATCGA GGCGATGGGT
GTCTCTTTGG CGGGACAGGT TAAGAGCAAG GGTGCGAGCG TCCTTCTTGC GCCAACCGTC
AATATCCATC GGTCCGGGTT GAACGGGCGC AATTTCGAAT GCTATTCCGA AGACCCGATG
CTGACGGCGG CTTTGGCTGT TGCTTATATC AAAGGCGTGC AGAGCCAGGG TGTGGCGGCC
ACGATCAAGC ATTTCGCCGG CAATGAATCC GAGATCGAAC GGCAGACGAT GTCCTCGGAT
ATCGATGAAC GCGCCTTGCG CGAAATCTAT CTTCTGCCCT TCGAACAGGC GGTGAAAAAG
GCGGGTGTTA TGGCGGTTAT GTCCTCCTAT AACCGGCTGA ACGGTACCTA TACAAGCGAA
CATAACTGGT TGTTGACGGA TGTGCTGCGT GAGCAATGGG GCTTTGACGG CATTGTCATG
TCCGACTGGT TCGGCTCCCA TTCTACATCC GAATCCGTCA ATGCCGGGCT TGATTTGGAA
ATGCCCGGCC CAACTCGTGA TCGTGGTGAA AAGCTGGTGC AGGCGGTTCG CGACGGCACC
GTCAGGCCAG AAACGGTGCG CGAAGCGGCG GGGCGCATTC TCACTCTGCT GGAGCGTGTC
GGGGCGTTTT CGTCCGCGCC TGACCTGTCC GAACATGCCG AAGATCTGCC CGCTGATCGG
GCGTTAATCC GCAAAATTGG CGCTGAAGGT GCGGTCCTTC TGAAGAATGA CAACATCCTG
CCGTTGGAAA AAGCTTCCCT GAAGCGTGTC GCGGTTATTG GGCCAAATGC GGCTGTTGCC
CGGGTGATGG GCGGCGGCAG CGCCCAGATC AATGCACATT ATACAATCAG CCCGCTGGAG
GGCATTCGTG CGGCTTTGCA AGGCACTGCT GATGTGCAGC ACAGTGTGGC CTGCGGCAAT
AGCCGGTTGG TCAAGCTGTT TTCGCAGCCG GTCACTGTCG AGTATTTCAA GGGCGTCAAT
TGTCAGGGTA CTCCTGTTGC AGCGGAAGCG GTGCAGACAG GGGAGTTTTT CTGGTTCGAA
CTGCCGTCGC CGGATCTGTC TCTGACGGAT TTCTCAGTGC GTTTCACCGG CACCTTCACG
CCGCAGGAGG ATGGTCCGCA TCTGCTGGGC ATGACCAATT CGGGCCTTGC GAAGCTTTAT
GTCGATGGAG AACTGGTAGT TGACGGCTAT ACCGATTGGA AGCGCGGCGA AAATTTCTTT
GGCACCGCCA ATGATGAAAT TCGGCACTCG GTGGAGATGA AGGCTGGCCG TAGTTACGCA
ATCAAAGTTG AATACCTGTC GCCACCGCCA GAGGAATACG GCATCCATAT CACCGCGATT
CGCTTCGGCA TCGAAAGAAT TCTCGGTGAA GACGCGATGG TGGAAGCAGT AGAATGCGCA
AAAGGCGCAG ATGTGGCGCT GCTTTTTGTC GGGCGCGAGG GACAATGGGA TACGGAAGGT
CTCGATCTGC CCGATATGCG CCTGCCGGGC CGTCAGGAAG AATTGATCGA GCGCGTTAGC
GCCGTTAATC CGAATTGCAT TGTTGTGCTG CAAACTGGTG GGCCGGTTGA AATGCCTTGG
TTGGAAAAGG TCAAGGCGGT GCTTCAGGTC TGGTATCCAG GCCAGGAGCT TGGCAATGCT
GTGGCCGATA TGCTGTTTGG CGATCAGGAA CCGGGCGGGC GTCTCCCGCA GACGTTTCCA
AAGCAGTTGT CGGATAACTC CGCCATCACA AATGACCCGT CGATCTATCC CGGCATGGAT
GGCCATGTGC GTTATGAGGA AGGGGTATTT GTCGGTTACC GTCATCACGA CAGCCGTACC
ATCGAGCCGC TTTTTCCCTT CGGATTTGGG CTTAACTATA CCAGTTTTGA GTGGGATGAG
CCAAAGGCTT CCGCGTCCGA AATGACGGCA TCCGGCGTGA CAGTCTCCGT CAGGGTCTCC
AATACCGGAA AGCGGGCAGG GTCCGATGTG GTGCAGCTTT ACGTCGAGGC ACCGGTCTCT
GGTGTTGAGC GCCCCTTGAA GGAGTTGCGT GCCTTCGCCA AAATTGCCTT GGAGCCAGGT
GAAAGCGGCG AAGTGACGCT TGAAATCAAC CCGCGCGATC TGAGTTATTA CGATGTCGAT
GCGGCGGCAT TCCGTGCGCC AGCGGGTGAC TATCGGCTGC TGATTGGCGC CCATGCCCAG
GACATCCGCA GCGCGATCAC CATTGTCAAT CCGCAGGAAT GGCTTGGCGC TGTCGGTGAC
AGGACGATCT GA
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| Protein sequence | MIDSLLDEMT LEEQVSVLSG ADFWTTVPVE RLGIPKIKVT DGPNGARGGG SLVGGVKATC
YPVAIALGAT WNPALIEAMG VSLAGQVKSK GASVLLAPTV NIHRSGLNGR NFECYSEDPM
LTAALAVAYI KGVQSQGVAA TIKHFAGNES EIERQTMSSD IDERALREIY LLPFEQAVKK
AGVMAVMSSY NRLNGTYTSE HNWLLTDVLR EQWGFDGIVM SDWFGSHSTS ESVNAGLDLE
MPGPTRDRGE KLVQAVRDGT VRPETVREAA GRILTLLERV GAFSSAPDLS EHAEDLPADR
ALIRKIGAEG AVLLKNDNIL PLEKASLKRV AVIGPNAAVA RVMGGGSAQI NAHYTISPLE
GIRAALQGTA DVQHSVACGN SRLVKLFSQP VTVEYFKGVN CQGTPVAAEA VQTGEFFWFE
LPSPDLSLTD FSVRFTGTFT PQEDGPHLLG MTNSGLAKLY VDGELVVDGY TDWKRGENFF
GTANDEIRHS VEMKAGRSYA IKVEYLSPPP EEYGIHITAI RFGIERILGE DAMVEAVECA
KGADVALLFV GREGQWDTEG LDLPDMRLPG RQEELIERVS AVNPNCIVVL QTGGPVEMPW
LEKVKAVLQV WYPGQELGNA VADMLFGDQE PGGRLPQTFP KQLSDNSAIT NDPSIYPGMD
GHVRYEEGVF VGYRHHDSRT IEPLFPFGFG LNYTSFEWDE PKASASEMTA SGVTVSVRVS
NTGKRAGSDV VQLYVEAPVS GVERPLKELR AFAKIALEPG ESGEVTLEIN PRDLSYYDVD
AAAFRAPAGD YRLLIGAHAQ DIRSAITIVN PQEWLGAVGD RTI
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