Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6256 |
Symbol | |
ID | 7381297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1247700 |
End bp | 1248359 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643649719 |
Product | Transcriptional regulator |
Protein accession | YP_002547943 |
Protein GI | 222107152 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.109242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAC AGGACATATC CGATGCAGGC CGCACTCCCG TCGATACGGT CGCAGGCCGC CGCCGGAATT CGGTGAAAGG GGCCGCGCGG CGAGAAGAAA TCCTGCAGGC TGCGCTCAAC CGTTTTGCCA AGGATGGCTT TCAAAATGCT GCAATCGCAG ACATTGCTGA GGATGTCGGC CTGTCTCTTC CTGGTCTTCT GCATTATTTT CCGACCAAGG TTGACCTTCT CCTGGCGATC CTGGAACGAC GAGACAAAGA GACAGCGCCG GACTTAAACA AGAAAATTCC ACATTGGCGC GATTTCCTCG GCCTATTGGT TGAGGTCACC AACCAAAACA TGCAATCGGA GGGGGTTGTG CGGGCATTTT CGATCCTTAA CGCCGAAAGC CTGCTTGCAG GGCACCCGGC CCAGGCGTGG TTTCACAAAC GTAGCCTGCA ACTGCGCCAC AAACTGGCCA GTATCTTTGC AGAAGGCATT CTGAATCATG AGATCAAATC CGACATCGAT CCCCAAGGGA TAGCAACGGA AATTATCGGC CTGATGGATG GCTTGCAAAT GCTCTGGCTT CGGCTGCCCG ACAGTACAGA TATGGGCGTC CTGTTTTCCG CTTATGTCGC GCGGCTGATC GCATCGATTG AGGTCGCTGA AAAGCCTTAA
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Protein sequence | MARQDISDAG RTPVDTVAGR RRNSVKGAAR REEILQAALN RFAKDGFQNA AIADIAEDVG LSLPGLLHYF PTKVDLLLAI LERRDKETAP DLNKKIPHWR DFLGLLVEVT NQNMQSEGVV RAFSILNAES LLAGHPAQAW FHKRSLQLRH KLASIFAEGI LNHEIKSDID PQGIATEIIG LMDGLQMLWL RLPDSTDMGV LFSAYVARLI ASIEVAEKP
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