Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6243 |
Symbol | |
ID | 7381286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1236340 |
End bp | 1237440 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649708 |
Product | hypothetical protein |
Protein accession | YP_002547932 |
Protein GI | 222107141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGCC CAATTGACAT TCCTGGTCCA AGACCCGGCG ATCCAGTTCT CTCGCTGTCA ACACCGCTGC CGTTAATCGA CGAGGATCGG CTCGCTGCCA ATATCGCCCG GGTTCAATCC TATATGGATG TCCACAGCTT AGCCTTTCGC CCGCATATCA AGACCCACAA GATTCCACCC CTCGCCCGCC AGCAGCAGGA GGCCGGTGCG ACCGGCATCA ATTGCCAGAA AATTACCGAG GCGGAGGTGT TTGCCGAGGC CGGGTTCGAG GATATATTGA TTACCTTCAA TATTCTTGGG CCTGAAAAGC TCGTGAGGCT CTCTGCCCTG AATGAGCAGA TATCCGGCCT GAAGGTGGTG GCCGACAGCA TCGTCACCGT TGAGGGCCTT TCAAACTATT TTGCAGATCG CAAACCTTTG ACCGTATTGG TGGAATGCGA CACCGGGGGA GGACGCTGCG GGGTGCAGAC ACCAGCAGAC GCCGTTGGCC TGGCGCAAGC GATTTCCGCC AGCAAAGGCC TGCGGTTCGG CGGAATAATG ACATATCCCA AGGCCCACAC AGAACAGGTC GTCGAAAGCT TTTTTGCGCA AATCCTCACA AGCCTGACCA CTCTGGGCAT TGCCTGTCCG ATTGTCTCGA ACGGCGGAAC GCCAAGCCTA TTTTCCGCCC ATCTTGTGCC ATCAGCCACC GAGCATCGCG CTGGAACCTA TATCTATAGC GACCGTAGCA TGGCGAAGGC TGGACATGGC ACGCTTGACG ATTGTGCAAT GCATATCCTA GCCACCGTCG TGTCGCGCCC GACACCGGAT CGCGCCATTC TGGATGCGGG CTCCAAAGCG CTGACATCCG ACCTGCTTGG CTTTAACGAT TATGGCTTGA TTGTCGACTA CCCGGATGCC GTCATTATCG GCCTGTCTGA AGAACACGGA ACCGTCGATC TCTCGAGGAT TACTGGCAGA CGGCCCGAGA TCGGCGAGAA AGTGCGGATC ATTCCCAACC ACACCTGCGT GGTGTCAAAC CTGTTCGACA TCATGACATT TCACCGGGAT GGTGTGGTGA CGCGGGTGGA AGATGTGGCG GCACGCGGCC TGGTCTGGTA G
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Protein sequence | MDRPIDIPGP RPGDPVLSLS TPLPLIDEDR LAANIARVQS YMDVHSLAFR PHIKTHKIPP LARQQQEAGA TGINCQKITE AEVFAEAGFE DILITFNILG PEKLVRLSAL NEQISGLKVV ADSIVTVEGL SNYFADRKPL TVLVECDTGG GRCGVQTPAD AVGLAQAISA SKGLRFGGIM TYPKAHTEQV VESFFAQILT SLTTLGIACP IVSNGGTPSL FSAHLVPSAT EHRAGTYIYS DRSMAKAGHG TLDDCAMHIL ATVVSRPTPD RAILDAGSKA LTSDLLGFND YGLIVDYPDA VIIGLSEEHG TVDLSRITGR RPEIGEKVRI IPNHTCVVSN LFDIMTFHRD GVVTRVEDVA ARGLVW
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