Gene Avi_6243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6243 
Symbol 
ID7381286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1236340 
End bp1237440 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content57% 
IMG OID643649708 
Producthypothetical protein 
Protein accessionYP_002547932 
Protein GI222107141 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGCC CAATTGACAT TCCTGGTCCA AGACCCGGCG ATCCAGTTCT CTCGCTGTCA 
ACACCGCTGC CGTTAATCGA CGAGGATCGG CTCGCTGCCA ATATCGCCCG GGTTCAATCC
TATATGGATG TCCACAGCTT AGCCTTTCGC CCGCATATCA AGACCCACAA GATTCCACCC
CTCGCCCGCC AGCAGCAGGA GGCCGGTGCG ACCGGCATCA ATTGCCAGAA AATTACCGAG
GCGGAGGTGT TTGCCGAGGC CGGGTTCGAG GATATATTGA TTACCTTCAA TATTCTTGGG
CCTGAAAAGC TCGTGAGGCT CTCTGCCCTG AATGAGCAGA TATCCGGCCT GAAGGTGGTG
GCCGACAGCA TCGTCACCGT TGAGGGCCTT TCAAACTATT TTGCAGATCG CAAACCTTTG
ACCGTATTGG TGGAATGCGA CACCGGGGGA GGACGCTGCG GGGTGCAGAC ACCAGCAGAC
GCCGTTGGCC TGGCGCAAGC GATTTCCGCC AGCAAAGGCC TGCGGTTCGG CGGAATAATG
ACATATCCCA AGGCCCACAC AGAACAGGTC GTCGAAAGCT TTTTTGCGCA AATCCTCACA
AGCCTGACCA CTCTGGGCAT TGCCTGTCCG ATTGTCTCGA ACGGCGGAAC GCCAAGCCTA
TTTTCCGCCC ATCTTGTGCC ATCAGCCACC GAGCATCGCG CTGGAACCTA TATCTATAGC
GACCGTAGCA TGGCGAAGGC TGGACATGGC ACGCTTGACG ATTGTGCAAT GCATATCCTA
GCCACCGTCG TGTCGCGCCC GACACCGGAT CGCGCCATTC TGGATGCGGG CTCCAAAGCG
CTGACATCCG ACCTGCTTGG CTTTAACGAT TATGGCTTGA TTGTCGACTA CCCGGATGCC
GTCATTATCG GCCTGTCTGA AGAACACGGA ACCGTCGATC TCTCGAGGAT TACTGGCAGA
CGGCCCGAGA TCGGCGAGAA AGTGCGGATC ATTCCCAACC ACACCTGCGT GGTGTCAAAC
CTGTTCGACA TCATGACATT TCACCGGGAT GGTGTGGTGA CGCGGGTGGA AGATGTGGCG
GCACGCGGCC TGGTCTGGTA G
 
Protein sequence
MDRPIDIPGP RPGDPVLSLS TPLPLIDEDR LAANIARVQS YMDVHSLAFR PHIKTHKIPP 
LARQQQEAGA TGINCQKITE AEVFAEAGFE DILITFNILG PEKLVRLSAL NEQISGLKVV
ADSIVTVEGL SNYFADRKPL TVLVECDTGG GRCGVQTPAD AVGLAQAISA SKGLRFGGIM
TYPKAHTEQV VESFFAQILT SLTTLGIACP IVSNGGTPSL FSAHLVPSAT EHRAGTYIYS
DRSMAKAGHG TLDDCAMHIL ATVVSRPTPD RAILDAGSKA LTSDLLGFND YGLIVDYPDA
VIIGLSEEHG TVDLSRITGR RPEIGEKVRI IPNHTCVVSN LFDIMTFHRD GVVTRVEDVA
ARGLVW