| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6229 |
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| Symbol | |
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| ID | 7381275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1224926 |
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| End bp | 1225648 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643649697 |
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| Product | transcriptional regulator TetR family |
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| Protein accession | YP_002547921 |
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| Protein GI | 222107130 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.93873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGGCC AGCGGCTGGA ACAGACTTTC GAGGAAGGGC CTGATCCCGA AGCGGAAAGC
CCGACACCCA TGCAATGCCG TCAGGGGCGT ATGATACGCC ATCCCGATGC GACCCGAGCA
ATCATTCTGG ATGCCGCCAT TCAAGAGTTT GCCGCAAAGG GTTTTGCAGG CGCCCGAGTC
GACGCCATTG CATTGCGTTC GAAAACCAAC AAACGAATGC TCTACCATTT CTTTGGAGAC
AAGGAGGGCC TTTACGTCGC GGTTCTCGAG GTGATTTTCT CCAATGTCAC CGCTGCTGGA
AAAAGCCTTC ACCTGTCGCG ACGTCAACCG CTTGATGGCA TACGCGAACT GGCTTTACAC
ACCTGGACCT ATTTTCTGAC TCACCCGGAA TTCGTCAGTC TTCTTGCCAC CGAAAACATT
CTGAGGGCTG AATATTCGAG CCGATCAAAG ACCATTCCCT CGACCCATGG TCCATTGCTC
GCGGAAATCG AAAAGCTTCT GCAGCGAGGG ATTGAGCAAG GTGTGTTTCG TGCCGATGTC
AATCCGGTGA CGGTCTACAT GACGATTGCT GGCTTAAGCT TCTTCTACAT CAACAATCGC
TACACGCTGG CGCTCAATCT TAACCCGGAC GTCTGGCAAC CGACCGCTAT CGACGCCTGG
GGCGAACATA TTGTGACGGT CACACTGGCT TTCCTTGCAC CGGCAACCAT ACCCGGCACC
TGA
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| Protein sequence | MTGQRLEQTF EEGPDPEAES PTPMQCRQGR MIRHPDATRA IILDAAIQEF AAKGFAGARV
DAIALRSKTN KRMLYHFFGD KEGLYVAVLE VIFSNVTAAG KSLHLSRRQP LDGIRELALH
TWTYFLTHPE FVSLLATENI LRAEYSSRSK TIPSTHGPLL AEIEKLLQRG IEQGVFRADV
NPVTVYMTIA GLSFFYINNR YTLALNLNPD VWQPTAIDAW GEHIVTVTLA FLAPATIPGT
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