Gene Avi_6201 details

Gene Information

• Locus tag: Avi_6201
• ID: 7381254
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 1201345
• End bp: 1203510
• Gene Length: 2166 bp
• Protein Length: 721 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643649676
• Product: hypothetical protein
• Protein accession: YP_002547900
• Protein GI: 222107109

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.147452
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCC TGAAAATCAC TCTGCTTGGC TCGGCTGCTG TTCTGGCGCT GACATTGCCA 
GCCCATGCTG ACCCGATCAG CACGGCATTG GGCAGCTTCA TCTTTCAGTC GCTGTACACG 
ATTGGCGTTT CCGGCGCGGT GGCCAATTTT GTTGCGGTCA ATGGGCTTGC GCTGCTGGCG 
GTGGCCGGGT CTGTCGCATC GAGTTTTTTT GCAACGAAGG GGTCGGTTAA ACCGTCCGAT 
GCCAAGTCTA CCTATTCGAC CGAGGAAAGC TCGGTTCGGG AAGGTATCGG CTACACGACA 
GGCGCTGGCG TCAAATTCTA CGGCAACACG GATGGCTCAA CCCGCTGGCG GTTGAATGGG 
CATACCGTTG GCCCGATTGA TGCAATTACC GAATATTACC TTGGTGAAAA GGAAGTGGTG 
ATCGATGACG ATACCGGCTA TGTGACATCG CCGCCGTGGC CAAAGTCGGA CGGCACAAGC 
TGGGCAAAGA TTGAGCATAA AGCGGGTGGC GGCGGCGAAA CGGCCTGGCC TGCGCTGGTT 
GCGGCCTTTC CTGGCAAATG GACATCGGCC CATAAGGTTG AGCGGACTTT TCAGACGCTA 
TCGACATTTT ACAACCCGGG CCTGGAAAAA GAGAAATACC TTTCGCTGTA TCAAGGCGGC 
GTGCCAGAGC TGCGGGTGGT TTACCGGGCA TCGCTGGTTT ACGACGCGAC CGACGAAAGC 
CAGGACTCCA CCAATGACGC GACGTGGCGT TGGACGGACA ATAGTGTCTG GTGCATCATC 
CATGTGATGC GCCGCGATCC GCGGCTGTTT TCGCCTGACA TGTGGGATTG GACGCTCAAC 
ACGTTGACGG CGGTCAAGTG CGATACCCAT GTGGCGACCC TGACCGGTAC GGAAAAGCGG 
TCTCGGCTTT GGGGGCAGTG GAACTATGAG GATAAGCGCA ACGATACCGT TCAAAGCATG 
CTGGATAGTG CTGGACTGGT GATCCGCACC ACGCAGGCGG GCAAGATCTA TCTCGATATG 
ATTGATGATG CGCCGGTTGC GGAAATCAGC TTCACCGATG ACGATATTGT TTCCGATGAC 
TGGAGCGGCG GACCGGAGGC GGTGGATCGT CCCAACGTCT GTCGGGTGAA ATATTATTGC 
GAACCGCGTG ATTTCGAGGT CGCGGAAATA GACATGACTG GCATCGCCTG GGCGCAGATT 
GACGATGAAG TCACGCGCTA TGGTGAGAAA TTTCACGATG TCGAACTGTC TTATTGCCCC 
TCGGCAAGCC AGGCGCAGCG CATTGCCCGG CGGCTGTTTG CTCTTGAGCG TGCCGAAACC 
TATTCGGCCA CCATGAAGAT GGTGGGCATG GCGGCGTGGG GGCTGCAATA TGCTGAGATC 
CAGACTGAGT ATGATGACAC GCCGCGCCTG ATGCAGTTGG GCGCACCGGA AATGAATGAC 
GATGACGGCA CGGTCTCGAT CTCTGGGAAA TACTGGCCTG AATTGTCGGC CTGGAACCCA 
GCAACAGATG AAGCCGCCGC CCCGGAAGAT ACACCGGCCC TCAACTATGT GGCCGATATC 
GATCCACCGG GGCCGCCGAC TTATGCGGTG CAAACCACGG CTCCAGACGG CACCAGACAG 
TTGCGGTTGC TTTATTCCGT CTCAGGGTCG CCTGATGTTG TCGAGGTGAA TTACCGCTCC 
TATTCCGGTG GGTCGCCAAG CTCCTGGCGC TCGATGACGG AGCGGTCTGG CGTCGCTTAT 
GTAGCGCTCA CATCCGATAT CCTTGGGCAG ACGATTGATG CGCGGGCGCG GGTTTTTGAG 
GATGAAGAAG GTTCGGATTT CTCAACGACT GCGAGCCTTG TCGTCGGAGT TGATAACGGG 
TTGCCACCAG CGCCGTCGCT TGTGTCGGGC GGAATAACTG TCGATGGGAC AACCGCCACC 
CTTAGTGTGT CGGTTGTCAG TAATGACTTC CGGGTTGCGG CCATCCGCCT GATGTATGGG 
CCGACTGTGC TTCAGACTGT AGCGGTTTCG CCCGGCGTTG CCATTGGCTT TTCAAACACG 
ACCTCCGTTG GATCTGGTGG CGGCACAGTC GAATGGAAAA TCTACGGCGT CGTCACCAAC 
GGATCAGTTG GCGCTGCGCT GACGCTTTCG GCCTACATCC CAGATACCGG CGGAGGTAGC 
GACTAA 

 

Protein sequence

MKILKITLLG SAAVLALTLP AHADPISTAL GSFIFQSLYT IGVSGAVANF VAVNGLALLA 
VAGSVASSFF ATKGSVKPSD AKSTYSTEES SVREGIGYTT GAGVKFYGNT DGSTRWRLNG 
HTVGPIDAIT EYYLGEKEVV IDDDTGYVTS PPWPKSDGTS WAKIEHKAGG GGETAWPALV 
AAFPGKWTSA HKVERTFQTL STFYNPGLEK EKYLSLYQGG VPELRVVYRA SLVYDATDES 
QDSTNDATWR WTDNSVWCII HVMRRDPRLF SPDMWDWTLN TLTAVKCDTH VATLTGTEKR 
SRLWGQWNYE DKRNDTVQSM LDSAGLVIRT TQAGKIYLDM IDDAPVAEIS FTDDDIVSDD 
WSGGPEAVDR PNVCRVKYYC EPRDFEVAEI DMTGIAWAQI DDEVTRYGEK FHDVELSYCP 
SASQAQRIAR RLFALERAET YSATMKMVGM AAWGLQYAEI QTEYDDTPRL MQLGAPEMND 
DDGTVSISGK YWPELSAWNP ATDEAAAPED TPALNYVADI DPPGPPTYAV QTTAPDGTRQ 
LRLLYSVSGS PDVVEVNYRS YSGGSPSSWR SMTERSGVAY VALTSDILGQ TIDARARVFE 
DEEGSDFSTT ASLVVGVDNG LPPAPSLVSG GITVDGTTAT LSVSVVSNDF RVAAIRLMYG 
PTVLQTVAVS PGVAIGFSNT TSVGSGGGTV EWKIYGVVTN GSVGAALTLS AYIPDTGGGS 
D