Gene Avi_6188 details

Gene Information

• Locus tag: Avi_6188
• ID: 7381243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 1194071
• End bp: 1194667
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643649665
• Product: hypothetical protein
• Protein accession: YP_002547889
• Protein GI: 222107098
• TIGRFAM ID: [TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.56372
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGTTC CGAAACGCAT TGTTGCTCCG GCGGCGTCTA TCCTGACGCT GAGTGAGATC 
AAGGAACATC TGCGGATCGA AGAGGATGAC GATGCGGAAA ACGATCTGCT CCAGGCGTTG 
ATTGCGGTCG CGGAAACGTA TCTGGATGGA TATTCCGGTG TTCTTGGCCG GTGCATGATC 
ACGCAGACGT GGCGCTATAG CCTCTATGGG TGGCCGTCAT GTCGGTTGGA TTTGCCGTTT 
CCTGATGTTT CCAGTGTCAT CGTTCGATAT CGGGATGATG ACGATGTAGA GCAGATTTTG 
CCGGAAAGCC AATATCAGGT GCTGGAAGGG GCTTGTGGAT CGTTTGTCCG GTGGTTCGAC 
AGCTTTTCCG GGCCATCGCT ATATGATCGC GGCGATGCTG TGCAGGTAGA TATGGTTTGC 
GGGTACGGCG ATACGGCGGC GGAGGTGCCT GCGAATATCA TCCACGCGGC AAAGCTGATG 
ATTGGGGCCT GGTACGAGAA CCGGGAAAAT ATCGTAATCA GTAACTTGAT CTCGCAACTG 
CCGATTTCTG TCAGTGCGCA GGCGCTTTTG GCGACCGTGC GACGGGTAGG TGTTTGA 

 

Protein sequence

MLVPKRIVAP AASILTLSEI KEHLRIEEDD DAENDLLQAL IAVAETYLDG YSGVLGRCMI 
TQTWRYSLYG WPSCRLDLPF PDVSSVIVRY RDDDDVEQIL PESQYQVLEG ACGSFVRWFD 
SFSGPSLYDR GDAVQVDMVC GYGDTAAEVP ANIIHAAKLM IGAWYENREN IVISNLISQL 
PISVSAQALL ATVRRVGV