| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6146 |
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| Symbol | |
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| ID | 7380791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1166745 |
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| End bp | 1167497 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649634 |
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| Product | membrane protein |
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| Protein accession | YP_002547859 |
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| Protein GI | 222107068 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3619] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.303422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCC ACTTGAAAAG TCTTGCCCAT CGCGACCGCA CCGAGACGAG CGACCGCCAT
CTGGCATTTT ATCTGACCTT CATTGCCGGC GCGGCCAATG CCGGCGGCTT TATGGCGGTC
GGTCAATATA CCTCTCACAT GTCGGGCATT GTCTCGTCCA TGGCGGACAA TCTGGTGCTG
GGCGATTTAA AACTTTTGCT GATGGGGCTG CTCGCTCTTT GTTTCTTTCT TGCTGGCGCT
GGCTTTTCCG CAATTTTGAT CAATTGGGGC CGCAGACGAG ATTTGAGGTC GGTCTATGCG
CTGCCATTGG CGGTTGAGGC GTGGCTGATG GGTGTGTTTG CCCTTTCCGG GGCGATCAGT
TTCAGCGAAA AGGGCGACGC GGTGGTGTTC GTCGTCATGC TTCTCTGCTT CATCATGGGC
TTGCAAAATG CCATCATCAC AAAACTCTCC GGTGCACGCA TTCGAACGAC CCACGTGACG
GGCTTGGTTA CCGATACCGG TATCGAACTT GGCAAGCTAT TGTATTGGAA CGGATACTCA
AATGGTAAAG TCACATACCC ACCGGTCCGG GCCGATTTAG CGAAGCTTTG GCTGCTGGTG
CGCATGGTTG GATTATTTTT CGGCGGCGGC GTGGTCGGGG CTATCCTGTT TCAACGAATC
GGCGTTTCCG CAGCGGCGTT TCTGGCGATA CCTCTGGCGG TTGCCGCTCT CTACCCGATG
CTTGAGGACT ATTCCTCCCA AAAGCAGCGC TGA
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| Protein sequence | MKSHLKSLAH RDRTETSDRH LAFYLTFIAG AANAGGFMAV GQYTSHMSGI VSSMADNLVL
GDLKLLLMGL LALCFFLAGA GFSAILINWG RRRDLRSVYA LPLAVEAWLM GVFALSGAIS
FSEKGDAVVF VVMLLCFIMG LQNAIITKLS GARIRTTHVT GLVTDTGIEL GKLLYWNGYS
NGKVTYPPVR ADLAKLWLLV RMVGLFFGGG VVGAILFQRI GVSAAAFLAI PLAVAALYPM
LEDYSSQKQR
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