| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6137 |
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| Symbol | |
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| ID | 7380785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1158465 |
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| End bp | 1160642 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649628 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547853 |
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| Protein GI | 222107062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.119326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGC TTATCGCAAG GTGCCGGCAT ACCGGCCTGA TCATCGCCAT CCTCCTCACA
AGCCTCTTCA GTGGATTAAT GTCAGGGGTT GCCGCGCAAG ACAGCGCTAA GGGTCCGGCC
AAAGCTGCAG CGGAACAGAA CAATCTAGTG CACCAGCAAG CCCTACCCGC AATCACCCCT
GTATCGTCCC CGTCACCCGA AGTAACCACT GCCCAAACTG CGCAGACGGG TTCCGCCACC
ATGGAAGCCG ACATGATGAT GGCTGCCTAC GGGGAAGTGG CAACTGCCCT TCGGCGCGGC
GGGACCGTCG CATTGACCGG CCTACAAAGC TTGCCAGCGG CGTTTAGCAA CAGCATGCAA
TCTTTGCATG AAGAGCAAAC GGGTATGAAG GAACTCAGCC TGACGGCCGC CAGCGCGATC
GTTGCCGGGC TCGCGACAGC AGCCGTGTTC CTGATGGCGT TCGCAAGGCT CATGCCCCGT
CTTAGGCCGG ACCGAGGGCT AGTTGCCAAG GTCTCATTGG CAGGACTGCG GCTCGCGGGA
GATCTACTTG CGGTGGTCAT CTTCGTGGTT TTGGCGCGCA ATGGCGCCCA TATGGGCATG
GTCTCCGGCT CATTTGGCAA GGAGGTCACC TCCGGCTTCA TTCACATTGC CATGACCACA
GCGATTTTTG CCAGTTTCGG ACGCCTGCTC TTTGCCAGGA TCAATGGTTT CGAACCGTTA
TTCGATATTG CCGACCCGTC CTGGCATTTA AAAATGATGG TGGGCTTCGG CTTTCTGTCC
GGCTTTACCC ATAGCAGCCT CAGTCTGGCC GATGCCCGCG GGCTTGCCCC GATGGCGGTG
GATGGCTGGC TGTTCCTCAG CTCCACCATC ATCACCGCCT ATCTGCTGGT CTGGTTTATC
GTCGGACGGA GCGACATCGC CAATTCTCAT TCCGGCCATG CCAACGGATG GCAGCGTATT
ACCGGCAATC TCATCGCCAA TTTCTACATC GTCTCCACAA TAATTATATG GCTGCTCGGT
CTTCTGGTCG CCGGCACGGC TCAAAACGTC CTCTGGGTGC GCGTGTCGGG CATCAGCCAG
ATAGTGTTCA TACTGATTCC CATCCTGCAT CGCGGTGTCT CAGGCTTGTT TCAATATCTG
GCAATACGAC GGGAAGCCGT CTATGGTCCG GGCTTCCATT CGGTCCTGCT CTGGGCCTTG
CGCATCCCGT TTTCCGGGGC AATCTGGCTG ATCGGAATTC ATATCACCGT CATCTTGTGG
CAACCGCTTC TGGCCAATGC CGGGGTGGAT GCCTCCTACT GGCTGAACCA TTTACAGCAA
TTTGGGATTA CCATTGTCTG TAGCGCCTTT GTCTGCGGTT TCCTCTGGAA GTTTTTCGAG
ACCATATCCC CGGTCAATAC CGTCAAACTG CCGGGTCACG AGGATGATGG CGAACAGAAA
ACCACCAGCC GGTTGTCGAC AGTTCTGCCT GTCGTGCGCA ATCTGGTTAT GGGCGCGGTG
CTCGCCGTCG CACTTCTGGT CATCCTGTCC TCACTCGGCG TCAATGTCGC GCCGCTTCTC
GCAGGCTTCG GCGTGCTTGG CCTTGCCGTC TCTTTCGGAT CGCAAGCGCT CGTCAAGGAT
GTCGTTTCCG GCATATTCTT CCTGGCGGAA GACGCCTTCA GGATCGATGA ATATATCGAT
GTTGGCAAGC TACAGGGCAC TGTCGAGCAG ATTTCCCTGC GCTCCGTTCG TTTGCGCCAC
CACAATGGGC CTGTGCATAC AGTACCTTTT GGCCAGATCG CCGCCGTTAC CAACTACAGT
CGCGATTGGG GCACGATTAA ATTCGAATTG CGCTTCGACC GCGACGCCGA TCTGGAAATG
ATCCGCAAGA CGGCCAAGAA AGTCGGTCTG TCACTGCTGG AAGAGCCGGA ATTTGCGGGT
GATTTTCTTA TACCTCTCAA AATGCAGGGC ATACAGGAGG TCAATGAGAA TTCCATGGTC
ATCCGCTTCA AGTTCACTTG CCGGCCCGGC AATCCCAGCC TGATCAAGCG CGAAGGTATC
AAGCGTCTAC TCGCCGCCTT CAAGGCCGCA GGGCTCAATC TCGCTTCCAA TGCTGTCGTC
GTACGCTCCG ATGGAACGAC AATCAGTGAT GCTGCTGCGG CCTCAACCCT ATCCGCAAAG
GCCGCCAACG CGCCTTGA
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| Protein sequence | MTQLIARCRH TGLIIAILLT SLFSGLMSGV AAQDSAKGPA KAAAEQNNLV HQQALPAITP
VSSPSPEVTT AQTAQTGSAT MEADMMMAAY GEVATALRRG GTVALTGLQS LPAAFSNSMQ
SLHEEQTGMK ELSLTAASAI VAGLATAAVF LMAFARLMPR LRPDRGLVAK VSLAGLRLAG
DLLAVVIFVV LARNGAHMGM VSGSFGKEVT SGFIHIAMTT AIFASFGRLL FARINGFEPL
FDIADPSWHL KMMVGFGFLS GFTHSSLSLA DARGLAPMAV DGWLFLSSTI ITAYLLVWFI
VGRSDIANSH SGHANGWQRI TGNLIANFYI VSTIIIWLLG LLVAGTAQNV LWVRVSGISQ
IVFILIPILH RGVSGLFQYL AIRREAVYGP GFHSVLLWAL RIPFSGAIWL IGIHITVILW
QPLLANAGVD ASYWLNHLQQ FGITIVCSAF VCGFLWKFFE TISPVNTVKL PGHEDDGEQK
TTSRLSTVLP VVRNLVMGAV LAVALLVILS SLGVNVAPLL AGFGVLGLAV SFGSQALVKD
VVSGIFFLAE DAFRIDEYID VGKLQGTVEQ ISLRSVRLRH HNGPVHTVPF GQIAAVTNYS
RDWGTIKFEL RFDRDADLEM IRKTAKKVGL SLLEEPEFAG DFLIPLKMQG IQEVNENSMV
IRFKFTCRPG NPSLIKREGI KRLLAAFKAA GLNLASNAVV VRSDGTTISD AAAASTLSAK
AANAP
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