| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6107 |
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| Symbol | tctE |
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| ID | 7380760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1130754 |
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| End bp | 1132157 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649603 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002547828 |
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| Protein GI | 222107037 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGGG TCGCCTACTC GCTCCGTCGC CGTTTGCTGG GCTGGTTGCT GCTATCAACT
GCACTCATCG GTGCCGTCGC CCTGATCGAT ACCTATTACG AGGCCGTCAA AACTGCCGAT
ACAGTCTCCG ACCGGGTTCT GGCCGGGTCC GCATTGGCGA TTGCCGAACG GGTCATCGTC
TCGGAAAATG GAGAGTTGGC GGTCGATATC CCCTATGTCG CGCTGGAAAT GCTGACATCA
GGAGCGCAGG ACCGGGTATT CTACCGCGTC GACGGCCCTG GTGGCCGCTT CATCACCGGT
TACCAGAACT TACCGACAGT TTCCGATTTC AAGGGGCAAT CGGCTGTGTA TATGGACGCT
GCTTTCCGCA ACGAGCCGAT CCGCATCGCG GCCCTGCAAC GGTCTGCCTC GACCGGTATC
GATTCGCTGC CCTTCGTGGT GACCGTGGCT GAGACGACGA TTGCGCGCAA TCAGCTCACC
CAGGCCATTC TGTTGCGCTC GGCTTTGCGG CTTTTGCTGA TGATTGCCGG TGCTGGCGCG
ATTGTCTGGG TCGCTGTCAC CTATTCGCTA CGCCCGCTTT ACCGGCTAGG AGAGGCCATT
GCCGAGCGCA GTCCGAACGA TCTGCATCCC ATCGAGCAAT CCGTTCCAAG CGAAGTCGAA
AACCTTGTCG AAACCGTCAA TTCCTTCATG GTCCGGCTGC AATCGGCGCT GGATGCCCTT
CGCCATTTCA CCGGCAATGC CAGCCATCAA TTGCGCACGC CGCTGGCGAT CATCCGGACA
CAGTTGGCGC TGTCTGCCCG CGCCACAAGT CTTGGTGATG CGCAATCGGC AGCGCGCAAA
GGCGATGAGG CGCTCGCCCA CGCTGAACAC ATTCTGGCGC AACTGCTGTT GATGGCCCGT
ATCGACGCTG CCAGTTCCAA CGAGCCACAA ATATCGCCCC GGATCGATCT TGTCCAACTG
TCTCAATCGA TCACCGCTGA TCATGTGCCA CGCGCCGCCG ATGCCGGTAT CGATCTCGGG
TTCGAGGGGC AGGATGGCCC TGCTTTCGTG CTGGCTGAAC CCTTACTGAT CGGAGAATTG
CTCAGCAATC TGATCGCCAA TGCCCTTGCC TATGCAGGGA ATGGCGCGGA AGTCACCGTG
CGCATCCGCC ACGACATGCG AAACGTTTCC CTGATCGTCG AAGACAATGG TCCGGGTATT
GCTCCCGATC GACGCAGCAT CGTGCGCCAA CGGTTCGCCC GGGGGGAACA CAACCCCTCC
CCGGGTTTGG GCCTTGGCCT GCCAATCGTT GAGGAAATCG CCAATCTCTT CAATGCCAAA
CTCACGCTTC AAGACACATC CGAGGGGCGC GGCCTGACAG TATCGGTCAC ATTTCCCAAT
GCCGCAAAAG CAGCGCAGGC ATAA
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| Protein sequence | MTGVAYSLRR RLLGWLLLST ALIGAVALID TYYEAVKTAD TVSDRVLAGS ALAIAERVIV
SENGELAVDI PYVALEMLTS GAQDRVFYRV DGPGGRFITG YQNLPTVSDF KGQSAVYMDA
AFRNEPIRIA ALQRSASTGI DSLPFVVTVA ETTIARNQLT QAILLRSALR LLLMIAGAGA
IVWVAVTYSL RPLYRLGEAI AERSPNDLHP IEQSVPSEVE NLVETVNSFM VRLQSALDAL
RHFTGNASHQ LRTPLAIIRT QLALSARATS LGDAQSAARK GDEALAHAEH ILAQLLLMAR
IDAASSNEPQ ISPRIDLVQL SQSITADHVP RAADAGIDLG FEGQDGPAFV LAEPLLIGEL
LSNLIANALA YAGNGAEVTV RIRHDMRNVS LIVEDNGPGI APDRRSIVRQ RFARGEHNPS
PGLGLGLPIV EEIANLFNAK LTLQDTSEGR GLTVSVTFPN AAKAAQA
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