| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6080 |
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| Symbol | alr |
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| ID | 7380734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1103312 |
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| End bp | 1104436 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649577 |
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| Product | alanine racemase |
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| Protein accession | YP_002547802 |
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| Protein GI | 222107011 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGT CTATCAGCCA GGATATGAAT GCCGATGCGT TTTCCGCCCG CCTCGTGATC
GACCTCGACG CGCTTGCCGA CAATTACCGC CAATTGGCCG CTGAGACCAC CCCGGCGGAA
ACCTCCGCCG TCGTCAAGGC CGATGCCTAT GGCCTTGGAG CCGCCCGCGT CGGCCCCGCG
CTCTACCGGG CTGGATGCCG GAAGTTCTTC GTGGCGAATG TGCAGGAAGC CGCCGGGCTA
AGGCAGCATT TGCCTGGGGA TGCCGAACTG TTCATTCTCA ATGGCTTACA GCCGGGTGCA
GAACCCTTTG CCGCAGCAAA TGGCTTCATA CCGGTGCTGA ATTCGCTGGA ACAGCTTGCC
AACTGGTCGA AAATGGCAAG CGAGTTCGGA CGAACCCTGC CCGCGATCCT GCAATTTGAT
ACCGGTATGT CGCGGCTCGG ATTTTCACCG GAAGAAGCCA ATGTGCTTGC AGGCGACCCC
GCCCTGTTAT CCGGCCTCTC CATCCGCTAC ATCATGAGTC ATCTCGCCTC AGCCGATGAC
AGCGCCAGCA CCCAGAATGC CGCGCAATTT TCGGTCATGC GCGAGCGATT GGCGCAATTT
CCGGGCATTG CCTTGTGCTT TTCCAATTCG GGCGGCATCT TTATCGACAA GCAGTTTCAC
GGCGCGTTGG TCCGCCCCGG CGTTGCCCTT TACGGTGCGG TGCCCAGCGA TCTGGCAGGG
CGCCGCATGA AGCCGGTGGT GCGGGTCGAT GCGAAGGTGA TCCAAACCCG AACGGTACCA
GCCGGAGCCT GCGTCGGCTA CGGCGCGACC TATGTGGCCA CCAAGGAAAC CCGGCTGGCC
ACCATCGCCA TCGGTTATGC TGATGGCCTG CCGCGTTGCT TGAGCGACCG TGGTGCCGCT
TACTATGGTG ATATCCGTTT GCCAATTGTC GGGCGGGTTT CGATGGACAG CATGACACTC
GATATTTCGG CCCTGCCACC CGGCACGTTG ACGCTGGGAA GTCTGGTGGA GATGATTGGT
CCGCACCAGA GCCTTGAGGA TGTGGCGCAA GCGGCGGGCA CCATCGCCTA TGAAATCCTG
ACCAGCCTTG GTCATCGCTA TCACCGCGAC TATATTTCAG CATAA
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| Protein sequence | MDMSISQDMN ADAFSARLVI DLDALADNYR QLAAETTPAE TSAVVKADAY GLGAARVGPA
LYRAGCRKFF VANVQEAAGL RQHLPGDAEL FILNGLQPGA EPFAAANGFI PVLNSLEQLA
NWSKMASEFG RTLPAILQFD TGMSRLGFSP EEANVLAGDP ALLSGLSIRY IMSHLASADD
SASTQNAAQF SVMRERLAQF PGIALCFSNS GGIFIDKQFH GALVRPGVAL YGAVPSDLAG
RRMKPVVRVD AKVIQTRTVP AGACVGYGAT YVATKETRLA TIAIGYADGL PRCLSDRGAA
YYGDIRLPIV GRVSMDSMTL DISALPPGTL TLGSLVEMIG PHQSLEDVAQ AAGTIAYEIL
TSLGHRYHRD YISA
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