| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6047 |
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| Symbol | impF |
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| ID | 7380873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1066750 |
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| End bp | 1067259 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649550 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547775 |
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| Protein GI | 222106984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.183356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGATC CATTACAACG GTTTCGCGCC TCTGAACGGG TATTGAACCG ATCCGTCCTG
GACCGGCTGC TGGACGATAC GCCTGATATG GACAGTGATC CGCAAACCAG CGTCAGCGAA
CAGGTGCGGG AGATGCGCGA AGTGATCCGC CGCGACCTGG AAGCGCTGTT GAACACCCGC
CGCTGCCCGC AAGCACCACC GGATGGCCTT AGCGAGTTGC AGGACGCGTT GGTCTCCTAT
GGCGTCGATG GTATTCTTTC GGCCAATCTT TCGACGGACG AATCCAAACT TCGGCTGGCA
AGACTGGTGG AACGGCGCAT TGCGCTGTTT GAGACCCGCC TCGCCGACGT CAAGGTCACG
ATCCTCAAAG GCAATACAGA GGGCGACCGC GCCTTGCGGA TGCGCATCAA CGGTACGTTC
CGTCTTTATG ACGGGATGCC GCCGGTCAGT TTCGAATCCC GCATCGACCC TTCCACCCAG
GCTTTCCGCA TCGAGGCGTC GAATGGCTGA
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| Protein sequence | MVDPLQRFRA SERVLNRSVL DRLLDDTPDM DSDPQTSVSE QVREMREVIR RDLEALLNTR
RCPQAPPDGL SELQDALVSY GVDGILSANL STDESKLRLA RLVERRIALF ETRLADVKVT
ILKGNTEGDR ALRMRINGTF RLYDGMPPVS FESRIDPSTQ AFRIEASNG
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