| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5981 |
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| Symbol | yteR |
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| ID | 7380816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 993593 |
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| End bp | 994708 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649491 |
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| Product | di-transpoly-cis-decaprenylcistransferase |
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| Protein accession | YP_002547722 |
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| Protein GI | 222106931 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTCG ATCTGGTCGA GTATTTCGAC GCCTATGCCC GTGATTATCA GCCTTATAAG
GGTGGCAGTT GGTGCTATGA GGACGGTTGT CTCTATGCTG GGCTGATCGC CCTACATGAG
GCGACCGGTG ATACCAGATG GTCGGCGCAT CTGAAGCGGC TGGTCGATGA CCAGCTGGAT
GATCAGGGCC AGATGCGTGA TTACGTGCTG ACCGAGTATA ATATCGACAA TATCCTGCCG
GGCCGGGCGC TGATTTTCCT GCTGAAAACG ACCGGTGACA ATCGTTACCA GGTTGCGGCA
GACCGGCTTG CCCGGCAATT GCAAAGCCAT CCGCGTCTTG GCGCCGGACC TTATTGGCAC
AAGCTGCGCT ATCCCCATCA AGTCTGGTTG GATGGGCTCT ATATGGGCCT CGCCTTCAAG
GCCGAATACG GAAAGTTGGC TGGCGAGGAG TCTATGGTCC GCGATGCGCT CGAGGAATTG
CTGGTGACGC TCGAGCTAAC CTCGGATGGT GTGAGCGGGC TTTATCGCCA CGGCTACGAC
GAGGAACGGC TGCAAGCCTG GGCCGATCCG CAAACCGGCC TGTCGCCCGC CCATTGGGCA
CGGGCGATCG GCTGGCTGGC GATGGCCATG GTCGATCTCT ATGGCCTGGT GCCAGAGGGA
GCGGATAAGT CGATGCTGGC CGAAAAGCTT GGTGAACTTC TCACCCGGCT TTCACACTTG
CGCACCGGGG ATGGCCGCTG GTTGCAGGTC ATCGATCAGC CCGATCTTAC CGGCAATTAT
CCTGAAAGCT CCGCGACGGC GATGTTCGCC TATGCCTCTC TGAAGGCAGC GCGGCTCGGG
ATCGCGGGAG CAACGGCAGA GGTCGGGTCA GAGGCATTGG AGAGCCTTCA CCGTCATGCG
CTTGGTCCCA ATGCCTCTGG CCGGATCGTG ATGAAGCAGA TTTGCTGTGT GGCCGGACTG
GGCGGGTTTG GCGGCGTCTA CCGGGATGGA ACGCCTGCCT ATTACCTGTC CGAAGCGTTG
AACGACGACG ATATCAAGGG TGTTGGCCCA TTGATGATGG CTGAAGCGGA GCGTCTGCGT
TGCGCGACAC ACTCCGCATC TCCCGCACTG GCCTGA
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| Protein sequence | MTVDLVEYFD AYARDYQPYK GGSWCYEDGC LYAGLIALHE ATGDTRWSAH LKRLVDDQLD
DQGQMRDYVL TEYNIDNILP GRALIFLLKT TGDNRYQVAA DRLARQLQSH PRLGAGPYWH
KLRYPHQVWL DGLYMGLAFK AEYGKLAGEE SMVRDALEEL LVTLELTSDG VSGLYRHGYD
EERLQAWADP QTGLSPAHWA RAIGWLAMAM VDLYGLVPEG ADKSMLAEKL GELLTRLSHL
RTGDGRWLQV IDQPDLTGNY PESSATAMFA YASLKAARLG IAGATAEVGS EALESLHRHA
LGPNASGRIV MKQICCVAGL GGFGGVYRDG TPAYYLSEAL NDDDIKGVGP LMMAEAERLR
CATHSASPAL A
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