| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5967 |
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| Symbol | |
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| ID | 7381051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 982967 |
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| End bp | 983794 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649479 |
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| Product | ABC-type amino acid transport/signal transduction periplasmic protein |
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| Protein accession | YP_002547710 |
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| Protein GI | 222106919 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.594037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAA GATTGTTGCT GAAGGCGGCG CTTGGGGCTG CCCTGTTGTT TGGCGCGAGC
CTTTCGGCCC ATGCCGAGGA TGCGCTGATG AAAATCAAGG CCGCAGGCAC GTTGAAGGTC
GGAACGGAAA CCGCCTTTGC GCCGTTCGAT TTTATTGATG CTGGCGACCA CGTCGGCCTC
AACGTCGATC TCTTTGCCGA AATCGGCAAG GAACTGGGCG TGAAGGTTGA GTGGATTGCC
CTGCCGTGGG ATGGTGTTTT GCCCGGCCTT GAAGCTGGCA AGTTCGATAT TGTTGCAGGC
CCCGCCACCG TCACCAAAGC GCGCATGGAG CGCTATCGCT TCACCGCACC CATTGCCGAA
GCCACCGTTG CCATCCTGAA AAAGGCTGGC GACAAGACCA TTACCAAGCC TGAGGATCTG
GCGGGTAAAT CTGTTGGTGT TGGCAAGGCC ACAGCCCAGC TGGCGCAGTT GCAGGAACTT
TCCGCAACCT TGCCGAAGAA AATTGATGTG CGTGAATATG TCTCCTTCAA CGACGCCTAT
GCCGATATGG CCGCAGGCCG CGTGGTGGCC GTTGCCAATT CACTGCCCAA TATCGCCTTC
GTTGCCAAGC AGCGCAATGG AGCTTTTGAA GTGGTGGTGC CACCCTTTGG CAAAAAGAGC
TATTTCAGCT TTGTTGGCAC CAAGGATGCA GACCACGCCA GCCTGATCGA TGCTGTCGAT
GCCGCCATCA TCAAGATGAA GGGCGATGGC CGCATGGCGA AATTGCAGGA AAAATGGTTT
GGCACCAAGT TTGATACGCC TGATAGCGTG AAAGACCCGG CGTTTTGA
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| Protein sequence | MQKRLLLKAA LGAALLFGAS LSAHAEDALM KIKAAGTLKV GTETAFAPFD FIDAGDHVGL
NVDLFAEIGK ELGVKVEWIA LPWDGVLPGL EAGKFDIVAG PATVTKARME RYRFTAPIAE
ATVAILKKAG DKTITKPEDL AGKSVGVGKA TAQLAQLQEL SATLPKKIDV REYVSFNDAY
ADMAAGRVVA VANSLPNIAF VAKQRNGAFE VVVPPFGKKS YFSFVGTKDA DHASLIDAVD
AAIIKMKGDG RMAKLQEKWF GTKFDTPDSV KDPAF
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