| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5960 |
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| Symbol | |
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| ID | 7381045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 976882 |
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| End bp | 978231 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649473 |
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| Product | N-formimino-L-glutamate deiminase |
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| Protein accession | YP_002547704 |
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| Protein GI | 222106913 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC TCCACGCAAA ACAGGCGCTA CTGCCAGATG GCTGGGCCAA GGATGTGCGG
CTGATGCTGA AAGGCCGTAG AATTTCCGCC ATTGAGCGGG GTGTTGAGGC GCAAGCTGGC
GACGAGCGGC ACGAGGTGTT GCTGCCCACA ATGGCGAACT TGCACAGCCA CGCCTTTCAG
CGCGGCATGG CAGGTTTGGC GGAGCTCCGC GGGCCGGACA ATGACAGTTT CTGGAGCTGG
CGCACGGTGA TGTATCGCTT TGCCCTGACC ATGAACCCGG AGCAGATGCA GGCCATTGCC
GCCCAGCTTT ATGTGGAAAT GCTGGAGGTC GGTTTTGGCC GGGTGGGCGA GTTTCACTAT
CTCCACCACG ACCGCGATGG CAGCCCCTAC AATAACCGTG CCGAGATGGC AGAGCGGATT
GTGGGAGCAG CGGAAGAAAC TGGCATTGGC CTCACGTTGC TTCCGGTGTT TTATGCTCAT
TCCGGCTTTG GTGGGCTTGC CCCCAATGAG GGCCAGCGGC GGTTTATTAA TGATCTCGAT
GGTTTTGCGA AGCTGTTGGA GGGGGCGAAA AAAGCGGCAT CAAATCTGCC CGGTAACGTC
ACAGGCATTG CGCCTCACAG CCTGCGGGCG GTGACACCGG AAGAATTATC AGCGCTGCAA
CAGCTCTCCT TTGATGGACC AATCCATATT CATGTGGCCG AGCAGGTCAA GGAAGTGGAC
GATTGCGTGG CGTGGTCTGG AAAGCGTCCC GTCGCGTGGT TGCTGGACAA CGCTGATCTC
TCATCCCGCT GGTGCCTGAT CCATGCCACC CACATGACGG ACGACGAAAC CATGCGGATG
GCAAAAAGCG GTGCCATTGC CGGGCTTTGC CCGATCACTG AGGCCAATCT GGGCGATGGC
ACGTTTAATG CTGAGGTTTT CTTGGGGCAG GGTGGGCGCT TTGGTATCGG CTCTGATTCC
AACATTCTGA TTGGCATTGC CGATGAGCTG CGCCAGCTGG AATATTCGCA ACGTCTCGCT
CACCGCGCCC GCAATGTCAT GGCCGTTCCC GGTGGATCAA CCGGGCGGTA TCTGTTTGAC
GGTGCCGTGG CAGGTGGCGC TGCGGCGTTG ATGGCAGAGA GTGGGCTGTC AGCGGGCAAG
CCTGCCGATC TCGTCAGTCT CAAGTCGCGC CATGATCTCG GTTTGAGCGG AGATCAGATT
TTGGACAGTT TTATCTTTGC CAATGGGGCT GCGGTGGATT GTGTTTGGGT GGGTGGGGCC
AAGCAGGTGG AGGCCGGGCG GCATATTGCT CGGGAGAGGG TTGCTGCGCG GTTTGCCGGT
GTTATGCAGG ATTTGATGGC GGCGTTTTGA
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| Protein sequence | MTTLHAKQAL LPDGWAKDVR LMLKGRRISA IERGVEAQAG DERHEVLLPT MANLHSHAFQ
RGMAGLAELR GPDNDSFWSW RTVMYRFALT MNPEQMQAIA AQLYVEMLEV GFGRVGEFHY
LHHDRDGSPY NNRAEMAERI VGAAEETGIG LTLLPVFYAH SGFGGLAPNE GQRRFINDLD
GFAKLLEGAK KAASNLPGNV TGIAPHSLRA VTPEELSALQ QLSFDGPIHI HVAEQVKEVD
DCVAWSGKRP VAWLLDNADL SSRWCLIHAT HMTDDETMRM AKSGAIAGLC PITEANLGDG
TFNAEVFLGQ GGRFGIGSDS NILIGIADEL RQLEYSQRLA HRARNVMAVP GGSTGRYLFD
GAVAGGAAAL MAESGLSAGK PADLVSLKSR HDLGLSGDQI LDSFIFANGA AVDCVWVGGA
KQVEAGRHIA RERVAARFAG VMQDLMAAF
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