| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5915 |
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| Symbol | |
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| ID | 7381006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 922965 |
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| End bp | 924473 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649428 |
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| Product | penicillin binding protein |
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| Protein accession | YP_002547665 |
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| Protein GI | 222106874 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA TGTTAAACTG GAAAGACGCC GAACGGACCG TCAACGCCGC TCTTGAACCT
TGGACGCAGG ACGGACCCGG TGGGGCGGTG ATCGGTTTTG ACCTAGATGG CATCCGGTTT
GGGTTAAGCG GTGGCATTGA AAACCTGAGC ACGGGGGCGT CTTTTACCCC GGATAGTGTC
ATTCGCTATG CCTCCGTCAC CAAACATGCA TTTTGTACGC TGGTTCTGTC TCATCCAGAC
CTCATCGGCC TTGATGATCG GTTGGGCGTG CATTTGCCGG AACTGCAAGA ACCACTCGCC
AGTGTCACCG TCGGCCGCGC CCTGGATATG AGTGGCGGCT TGCCGGATAC CCGAGAGGCG
CTGAGCCTGC TTGGACTGTC GGTCTATACG GAAACCCGAA GCGGGCCGCT GCTGGACTTT
CTCAGCCGAC AGACCCGGCT TAACTTTGCC CCAGGTTCCG AAGTTTCCTA TTCCAATACC
GGCTACAGGC TGGTGGAAGC AGCGCTTGAG CGCAAGGGCA TTTATTTCCG CGATTGTATC
CAGCGTGCCG GCGCTGAAAC CGGTGCGGTT TTCGATGCGC CAGAGGGTTG GAATGATGTC
GTTGCCGGGC TTGCTCCAGG TTATTGGCAT GACGGCCAGA AATGGCAGCT TTCCGCAGCT
GGCCTGCATA TTTCCGCCTC CGGCAGCATG ACGGGCAGCG CCCGCTCGCT TGCCCTATGG
CTGCAAGCCC TGCTGAAGGG AGAAGGCGCG CTGGCCGGGC GGCTCGAAGC CATGGCCGCT
CTGCGCCCGC TCGCCGATGG CAGGCCAAGC GGTTACGGGC TGGGACTGGC CCGCACACGG
TTAGGCGACA AGGACTTTGT TGGTCATGGC GGCTCGCATC CGGGCTACAA GACCTATTTT
CTGCTTGATC CTGAAACAGG CGTTGGTTTC GTCGTCGTTT CCAACCGGGA GGACACTAAC
GGCGCCAAAA TTGCCCAGTC TGCAATGATC GCGCTGTTCG GCCTGCCCCT CCCACGCTTG
TCGAGGGCAA TCCAAGACGG GCTTTACGTG GAAGACAGCG GCCCGAACTG GATTGAAGTG
AAGGCAAGCA GCATTATTGC ACTCGATGCC GAGGATGCGG CCTATGATGA CGGCGACGGC
TGGGTTTCCT CGCGCTCTTC CACCTCGCCG CTGCGGCTGA AAATGCAGGG AGACGATATT
ATCGGCGACG TCGGCCATGG GCCGCGCCAT TACCGACCAG CCAAGGACGA TGGTATCTCG
CCATCGCTTT CCGGCACCTG GCTTTCGCCG GAAGGCGCCC GATTTGAAAT CCACGGTTCC
ATGCTGGTGA TGGGCATCGG CCCAACCCGC CAGTCCATGC CGTTGCAAGC GCTGGGTGGC
GGTCGCTACC TCTTCACGCT TCACGATGGT CCCTGGACCA AGCGGATCTG CCTGAACATG
CTCAGTGAAA ACCGCCTTGA ACTGGTTCTG GCTCGCGCCC GAATGATTGA GTATCAGCGG
GCGGGATAG
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| Protein sequence | MEQMLNWKDA ERTVNAALEP WTQDGPGGAV IGFDLDGIRF GLSGGIENLS TGASFTPDSV
IRYASVTKHA FCTLVLSHPD LIGLDDRLGV HLPELQEPLA SVTVGRALDM SGGLPDTREA
LSLLGLSVYT ETRSGPLLDF LSRQTRLNFA PGSEVSYSNT GYRLVEAALE RKGIYFRDCI
QRAGAETGAV FDAPEGWNDV VAGLAPGYWH DGQKWQLSAA GLHISASGSM TGSARSLALW
LQALLKGEGA LAGRLEAMAA LRPLADGRPS GYGLGLARTR LGDKDFVGHG GSHPGYKTYF
LLDPETGVGF VVVSNREDTN GAKIAQSAMI ALFGLPLPRL SRAIQDGLYV EDSGPNWIEV
KASSIIALDA EDAAYDDGDG WVSSRSSTSP LRLKMQGDDI IGDVGHGPRH YRPAKDDGIS
PSLSGTWLSP EGARFEIHGS MLVMGIGPTR QSMPLQALGG GRYLFTLHDG PWTKRICLNM
LSENRLELVL ARARMIEYQR AG
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