| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5899 |
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| Symbol | nrtC |
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| ID | 7380995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 911524 |
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| End bp | 912795 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649417 |
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| Product | ABC transporter nucleotide binding/ATPase protein (nitrate) |
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| Protein accession | YP_002547654 |
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| Protein GI | 222106863 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.574642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGG CCGCCACACA GACGACCATT CTTTCCGCAG CGGTCGCAGG CCGGACGGAA
ACCCGTCACC TGCGCGTTGG CTTCATTCCG CTGGTCGATG CCTCAGTGCT GATCGCAGCC
GTTGAATTCG GCTTTGCGGC GCGCCATGGT CTGACGCTGG AGCTGGTGAA GGACGTGTCC
TGGGCCAATC TGCGTGACCG TCTGGCTTTC CAGCAATTCG ATGTCGCCCA CATGTTGTCG
CCAATGCCTG TCGCTTCCAT GCTCGGCCTT GGCTCCAACC CCTCCCCAAC GATTACGGCG
TTCTCGCTGG GACAGGGTGG CAATGCCATC ACACTGTCGA TCCGGTTGTT TCAGCGGATG
GAAGAAACCG GGTTGGTTGC AGCGCAGGCA AGCGCGCTGG ACAATGTCCG GGCGCTGGCC
CGTGTGCTGG AGACCATGCG CGAACGCGGT GAGCCCATGC CGACCTTGGG CATGACCTAT
CCGTTTTCCT CGCATAATTA CGAATTTCGT TATTGGCTGG CCGCTGGCGG CATCGATCCG
GACCGCGATG TGAAGCTGGT CGTGGTACCG CCGCCGCTCA CCTCCGATGC CCTGGCCGCA
GGCGCCATCG ATGGCTTTTG CGTCGGCGCG CCTTGGAACA TGGTGGCGTC AGAGCGCGGC
GTTGGCCGGA TCGTTGCTGC CAAGCAGGAC ATCTGGCCGT CGGCCCCTGA AAAAGTGCTG
GGCATGCGCC CGGATTGGGC GGCGGAAAAC CAGGAGACTG TTAACAGGTT GATCACGGCT
CTCGATGAGG CTGCCCGCTG GTGCGACGCA CCCGACAACC GCGATGCGCT GGCCGAAATG
CTCTCCGCAC CGCGCTATAT CGGCGCGCCT GGCGACATCA TCCGCCATGT GCTGGGTGGT
GTCTTCCATC TGGATGCCAA AGGCAATCGC CGGGTCATCG ACGACTATTT CCGCTTCCAT
GCCGAGCACG CAAATTACCC TCGCCCAAGC CAGGCCTTGT GGATCTATAG CCAGATGATC
CGCTGGGGAC AGGCGCGCTA CGACGAAGCC GATGTGGAAA AAGCAGCCAG CGCGTTTCGC
CCGGATATCT ACCGCGCCGC CCTTGGGCTG CCCGATCAGT TGGCAGAAGA CGATTTACGG
GTAGAAGGAC TGCGCGAGGG GGACCGTTTC ATCGATGGTT TTGTCTTCGA TCCTGCCAAA
CTCGCCTCCT ATGCCGGGCA ATTCCCGGTG CGCGCCCATC TTGCAACATC TGCGAGACCA
GAAGAAATTT GA
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| Protein sequence | MTEAATQTTI LSAAVAGRTE TRHLRVGFIP LVDASVLIAA VEFGFAARHG LTLELVKDVS
WANLRDRLAF QQFDVAHMLS PMPVASMLGL GSNPSPTITA FSLGQGGNAI TLSIRLFQRM
EETGLVAAQA SALDNVRALA RVLETMRERG EPMPTLGMTY PFSSHNYEFR YWLAAGGIDP
DRDVKLVVVP PPLTSDALAA GAIDGFCVGA PWNMVASERG VGRIVAAKQD IWPSAPEKVL
GMRPDWAAEN QETVNRLITA LDEAARWCDA PDNRDALAEM LSAPRYIGAP GDIIRHVLGG
VFHLDAKGNR RVIDDYFRFH AEHANYPRPS QALWIYSQMI RWGQARYDEA DVEKAASAFR
PDIYRAALGL PDQLAEDDLR VEGLREGDRF IDGFVFDPAK LASYAGQFPV RAHLATSARP
EEI
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