| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5863 |
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| Symbol | |
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| ID | 7380638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 878185 |
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| End bp | 879084 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649388 |
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| Product | Transcriptional regulator |
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| Protein accession | YP_002547625 |
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| Protein GI | 222106834 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTTA GTCTACGCCA GATCCGCTAT TTCGTGGCAA CCGCCGAATC CGGGCAGGTC
TCGCAGGCCG CCGTCAACCT CGCCATCTCG CAATCGGCAG TGACCACGGC GATCAAGGAG
CTTGAAACCA TTGTCGGTGC GCCGCTGTTC GAGCGCACGC CGCATGGCAT GGATCTGACG
GAAGCCGGGC GCCTGCTGCT GTCTCAGGCC TATGATATTC TGCGGAAGGT TGACGACATC
ACCACGCTCA ATCCCGTCAC CGGCAAGGTG CAGGGGAAAC TCAGCGTCGC TGCCAGCTAT
ACGGTGATCG GTTATTTTCT GCCGCTGCAT ATCGAGCGGT TGAAACGGCA GTTTCCGGGC
GTCGATATCC AGCTGTTCGA ACTCAACCGG GAAAGCGTCG AGGAAGGCCT GCTTGCCAAT
CGCTATGATG TCGCGGTGCT GCTGACCTCA AACATTCTCA ACCCGGAACT GACCACCGAA
ACCCTGCTGA ATTCGCAGCG GCGGCTTTGG CTCCCTGCCC GCCATCCGCT ACTGACCCGT
CCCTCGGTCG GGCTAAAGGA CGTGGCGGAG GAAAACTATA TCATGCTGAC GGTGGATGAA
GCGTCGCATA CCACGCTGAA ATACTGGAGC CCGACGCCCT ACCAGCCGAA AGTCACGCTG
CGGACATCCT CGGTCGAAGC CGTGCGCTCG CTGGTCGCCA ATGGCCAGGG CGTCGCCATT
CTCTCCGATA TGGTGCATCG GCCATGGTCA CTGGAGGGCA GGCGAATCGA GACGGTCACG
CTGACCGATC CGGTACCATC CATGGATGTT GGCCTTGCCT GGCGACGCAA TGCGGACTTC
AGCCCGGCCA TGGAGGCGTT CCGCGCCTAT TTCCGACGGG CCTTTCATAT TCCGGGGTAG
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| Protein sequence | MSLSLRQIRY FVATAESGQV SQAAVNLAIS QSAVTTAIKE LETIVGAPLF ERTPHGMDLT
EAGRLLLSQA YDILRKVDDI TTLNPVTGKV QGKLSVAASY TVIGYFLPLH IERLKRQFPG
VDIQLFELNR ESVEEGLLAN RYDVAVLLTS NILNPELTTE TLLNSQRRLW LPARHPLLTR
PSVGLKDVAE ENYIMLTVDE ASHTTLKYWS PTPYQPKVTL RTSSVEAVRS LVANGQGVAI
LSDMVHRPWS LEGRRIETVT LTDPVPSMDV GLAWRRNADF SPAMEAFRAY FRRAFHIPG
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