| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5840 |
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| Symbol | potI |
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| ID | 7380622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 860317 |
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| End bp | 861114 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649372 |
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| Product | ABC transporter membrane spanning protein (putrescine) |
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| Protein accession | YP_002547609 |
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| Protein GI | 222106818 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAGCG CGGAAGGTCG GGCAAACCAG ATATTGATTT GGACCATGAC GATTTTCGGC
CTTGTCGCGA TCTATGCGCC GCCACTTTAT CTGCTGGGGG TTTCCTTCAA TCCGTCGCTC
CAGCCCGGCC TGCCAAACCT GTCGGATCTG ACGGTGAAAT GGTATGCCGC CCTTCCAGCG
GAACCAGCGC TGATGGCGGC CCTTTGGCAA TCAGCCAGCG TTGCCCTGTT GACGGCAACA
GGCGCCACGC TGCTATCGCT TATGGCGGCG CTGGCCTATT TCGAGCTGCG AAGAACCCGC
GACATATGGT TTCTTGCCGT GATTCTGCCG ATGTTCGTGC CGGGTGTCAT CCAGGGGCTG
GCGCTGTCCA CGGTGTTCAG CCGCAGCGGC ATCAAGGCCT CGATCTGGAC ACTGACAGCC
GGACACCTGC TCTGGGCCAT GCCCTTCGCG TTTATCGTCA TTCTCACCGG TTTTTCCGCC
GTGCGGCCCG TCTTCCTGAT GGCGGCAGCG GATCTCGGCG CCAGCCGCTG GCGGCAGTTT
CGTGACATTA CCCTGCCGCT GATCCGCCCA GGCCTGATTA GCGCCTTCAT CTTCTCGTTT
CTTTTGTCGC TGAACGAGTT TACCCGCGCC TTCTATCTGG CTGGGCGGCA GAATACGCTT
CCGGTCGTGT TGTTCGGCAA GATGAATGGC GGCGCGTCTC CGACGATCTA CGCGATGTCC
GGCGCGATTT TCATCATCTC GGTGTTTTGC GTGGCTGTCA TTGCCGCTTT TGCAGGCTCA
AAAACCAAAG CCGGATAG
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| Protein sequence | MMSAEGRANQ ILIWTMTIFG LVAIYAPPLY LLGVSFNPSL QPGLPNLSDL TVKWYAALPA
EPALMAALWQ SASVALLTAT GATLLSLMAA LAYFELRRTR DIWFLAVILP MFVPGVIQGL
ALSTVFSRSG IKASIWTLTA GHLLWAMPFA FIVILTGFSA VRPVFLMAAA DLGASRWRQF
RDITLPLIRP GLISAFIFSF LLSLNEFTRA FYLAGRQNTL PVVLFGKMNG GASPTIYAMS
GAIFIISVFC VAVIAAFAGS KTKAG
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