Gene Avi_5807 details

Gene Information

• Locus tag: Avi_5807
• ID: 7380595
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 828585
• End bp: 829286
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643649345
• Product: hypothetical protein
• Protein accession: YP_002547582
• Protein GI: 222106791
• COG category: [R] General function prediction only
• COG ID: [COG1011] Predicted hydrolase (HAD superfamily)

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACGGG CGCTGACCAC CATTGGCCTC GATGCCGACG ATACGTTGTG GCAGAACGAG 
CAATTCTACC GGCTGACGGA AGAGCATTTC CGGTCGCTAC TGGCCGATTA CGCCGAGCCG 
TCGATGATTT CGGATCGGCT ATTGGAGGCG GAAAAGCGTA ATCTGGCCCA TTACGGTTTC 
GGCATCAAAG GTTTTACCCT GTCGATGATT GAGACCGCGC TGGAAATTAC CGAGGGAAGG 
GCGCCCGGCG CGGTGATCGG CGAGATCCTG GCGATTGGCC GCGATCTTCT CAGCCATCCG 
GTAGAAACAC TGCCCGGCGT GCGCGATGTG CTGGAAGCCT TGGCGGGGCG ATATTTCCTG 
GTGATGATTA CCAAGGGCGA CCTGTTCGAC CAGGAGCGCA AGCTGGCGCA ATCGGGGCTT 
GGCGACTTTT TCGACGCGGT TGAAATCGTC TCCGATAAAA ACGCCACCAC CTATCGGCGG 
CTTTTTTCAA AGCACGGCGA TGAGCCGGAA CGCGCGATGA TGGTCGGCAA TTCACTGAAA 
TCCGACATCG TCCCAGCGCT GGCGGTCGGG GCCTGGGGTG TGTTCGTGCC CCATGAACTG 
ACCTGGGTTT TTGAGCATGT GGAAAAGCCT GCCGATGCAC CCCGCTTTCG AGAATTACCT 
GAGATCAGCG CCTTGCCGGA ACTTGTTGCC TCAATTGGCT GA 

 

Protein sequence

MTRALTTIGL DADDTLWQNE QFYRLTEEHF RSLLADYAEP SMISDRLLEA EKRNLAHYGF 
GIKGFTLSMI ETALEITEGR APGAVIGEIL AIGRDLLSHP VETLPGVRDV LEALAGRYFL 
VMITKGDLFD QERKLAQSGL GDFFDAVEIV SDKNATTYRR LFSKHGDEPE RAMMVGNSLK 
SDIVPALAVG AWGVFVPHEL TWVFEHVEKP ADAPRFRELP EISALPELVA SIG