| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5762 |
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| Symbol | |
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| ID | 7381641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 792206 |
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| End bp | 793150 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649313 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547550 |
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| Protein GI | 222106759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.198648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTGG TGGAAGCGCC GCTGAACGGG CTGGAGCGGC TGTTTGGCCG CAAGCGCATG
CCGTATTTCT TCCTGGCGCC CAATCTGGTG CTGTTTGGCA TTTTCACCTT TTTGCCGATT
GCCATTTCCA TCGGCTATGC CTTTACCGGT GGCACCAATC TGTTCGTTTC CGAGCGTCCC
TATGTCGGGC TCGACAATTT TCGCCAATTG CTGACCTGCG GCGATTATAT GCAGCCGGGA
ACCTGCACGG AATCGCTGTT CTGGACGGCG ATCTGGAACA CGCTGTGGTT TGTCGGCTTC
AACGTTGTGG CGACCTTGCT GGTCTCGCTG ATCACGGCGC TGATCCTCAA CCGCGCCATG
GTGGCGCGTG GATTTTTCCG GGCGATGTTC TTTTATCCGG TGCTACTGTC ACCTGTGGTG
ATCGGCCTGA TCTGGAAATG GTTCCTGGAC CGCAACGGCT TGCTCAACGC CTTCCTGCAA
ATGCTCGGCG TGCCGCCGGA AATCTTTCTG CTGGAGGTCG GCTGGTCACG GTTTTTCGTT
GTCGTGGTCT CCGTCTGGTT CCACATGGGT TTCTACACGC TGATCCTGCT GGCCGGATTG
CAGGCCATTC CCAAAGATCT CTATGAGGCG GCGGCCATCG ATGCGGCCAC CCCGCGCCGG
GTGCTGTTTC GCATCACCCT GCCACTGCTC GCGCCCAACC TGCTGGTGGT GTTGATCTTG
TTGATGATCC GGTCTGTGCA GATTTTCGAT GAGGCCTGGG TGCTGACCAA TGGCGGCGGG
CCGGGGACGG CCAACAGTTT CATCGTGCAA TATATCTACC AGATGGCGTT CGGCAGCGAT
CTTCGGCTGT TTGGTCTTGC CTCGGCGGCG GCAACCCTGA TGGGCTGCGT TCTGCTGGTG
CTGACCCTGC TGCAACTTGG CCTCTCCAAG AAAATGGAGC AGTGA
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| Protein sequence | MLVVEAPLNG LERLFGRKRM PYFFLAPNLV LFGIFTFLPI AISIGYAFTG GTNLFVSERP
YVGLDNFRQL LTCGDYMQPG TCTESLFWTA IWNTLWFVGF NVVATLLVSL ITALILNRAM
VARGFFRAMF FYPVLLSPVV IGLIWKWFLD RNGLLNAFLQ MLGVPPEIFL LEVGWSRFFV
VVVSVWFHMG FYTLILLAGL QAIPKDLYEA AAIDAATPRR VLFRITLPLL APNLLVVLIL
LMIRSVQIFD EAWVLTNGGG PGTANSFIVQ YIYQMAFGSD LRLFGLASAA ATLMGCVLLV
LTLLQLGLSK KMEQ
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