Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5706 |
Symbol | celI |
ID | 7381592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 730153 |
End bp | 731040 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643649264 |
Product | hypothetical protein |
Protein accession | YP_002547501 |
Protein GI | 222106710 |
COG category | [K] Transcription |
COG ID | [COG4189] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.476701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTTC TGAAAGGGCT GGCCTCGCCA TTGCGGATCG CAATGCTCAA GCTATTGCAT GACAAGGGGG CGATGAATGT CAATGACATC GCTGCCGAAC TGTCGCTGCC GCAATCCACC GTCTCCACCA ATCTTCAGGT TCTGGAAGAC GCGGGGTTGA TCCGCACCGA GAGCCAGAAG GCCCGCAAGG GCAGCCAGAA GATCTGCTAT CCGACTGCCG AGGAGGTATT GGTTGTCTTC AAGAGCGAGC GGCGTAAGAT CGATGCCCAT GCCATCGAAG TCGCGATGCC GATCGGGCTT TATACCAGCT ATGAGGTGAC GGCACCCTGT GGTCTGTGTT CGCCCGACGG AATCATTGGC TTGCTGGACG TCCCCAATAC CTTCCTTGAT CCGGAACGGA TGAAAGCCGG GCTGATCTGG TTCACCAGAG GCTATGTGGA ATATCAATTC CCCAACAATG CCAAGCTATC CGGCAGCGCG ATCCGCGAAA TCGAGATTGC CATGGAGTTG AGTTCGGAAG TACCCGGCAC CAGTGCTGAC TGGCCATCCG ACATCACTTT GTCGATCAAT GGCACGGATG TCGGAACATG GACCTCTCCC GGCGATTTCG GTGACAAGCG CGGTGTTTAT ACGCCCGACT GGTGGAAGCT GAAGGGCTCC CAATACGGCA AGCTGAAGAA TTGGCGAATT TCATCAGAGG GCACGTTCGT TGATGGCGTC AAGATTTCCT CCATCGATCT CAATGCTATC GATCTGCTGG CCCATCATTC CATCCGGGTG CGGATTGGTG TGCGCGATGA TGCGCGCCAT CCCGGTGGCA TCAACATTTT CGGACGCGGA TTTGGCAATT ACGACCAGGA TATCGTGCTC CGTATCCGAA CAGAGTGA
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Protein sequence | MAVLKGLASP LRIAMLKLLH DKGAMNVNDI AAELSLPQST VSTNLQVLED AGLIRTESQK ARKGSQKICY PTAEEVLVVF KSERRKIDAH AIEVAMPIGL YTSYEVTAPC GLCSPDGIIG LLDVPNTFLD PERMKAGLIW FTRGYVEYQF PNNAKLSGSA IREIEIAMEL SSEVPGTSAD WPSDITLSIN GTDVGTWTSP GDFGDKRGVY TPDWWKLKGS QYGKLKNWRI SSEGTFVDGV KISSIDLNAI DLLAHHSIRV RIGVRDDARH PGGINIFGRG FGNYDQDIVL RIRTE
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