Gene Avi_5706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5706 
SymbolcelI 
ID7381592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp730153 
End bp731040 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content56% 
IMG OID643649264 
Producthypothetical protein 
Protein accessionYP_002547501 
Protein GI222106710 
COG category[K] Transcription 
COG ID[COG4189] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.476701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTTC TGAAAGGGCT GGCCTCGCCA TTGCGGATCG CAATGCTCAA GCTATTGCAT 
GACAAGGGGG CGATGAATGT CAATGACATC GCTGCCGAAC TGTCGCTGCC GCAATCCACC
GTCTCCACCA ATCTTCAGGT TCTGGAAGAC GCGGGGTTGA TCCGCACCGA GAGCCAGAAG
GCCCGCAAGG GCAGCCAGAA GATCTGCTAT CCGACTGCCG AGGAGGTATT GGTTGTCTTC
AAGAGCGAGC GGCGTAAGAT CGATGCCCAT GCCATCGAAG TCGCGATGCC GATCGGGCTT
TATACCAGCT ATGAGGTGAC GGCACCCTGT GGTCTGTGTT CGCCCGACGG AATCATTGGC
TTGCTGGACG TCCCCAATAC CTTCCTTGAT CCGGAACGGA TGAAAGCCGG GCTGATCTGG
TTCACCAGAG GCTATGTGGA ATATCAATTC CCCAACAATG CCAAGCTATC CGGCAGCGCG
ATCCGCGAAA TCGAGATTGC CATGGAGTTG AGTTCGGAAG TACCCGGCAC CAGTGCTGAC
TGGCCATCCG ACATCACTTT GTCGATCAAT GGCACGGATG TCGGAACATG GACCTCTCCC
GGCGATTTCG GTGACAAGCG CGGTGTTTAT ACGCCCGACT GGTGGAAGCT GAAGGGCTCC
CAATACGGCA AGCTGAAGAA TTGGCGAATT TCATCAGAGG GCACGTTCGT TGATGGCGTC
AAGATTTCCT CCATCGATCT CAATGCTATC GATCTGCTGG CCCATCATTC CATCCGGGTG
CGGATTGGTG TGCGCGATGA TGCGCGCCAT CCCGGTGGCA TCAACATTTT CGGACGCGGA
TTTGGCAATT ACGACCAGGA TATCGTGCTC CGTATCCGAA CAGAGTGA
 
Protein sequence
MAVLKGLASP LRIAMLKLLH DKGAMNVNDI AAELSLPQST VSTNLQVLED AGLIRTESQK 
ARKGSQKICY PTAEEVLVVF KSERRKIDAH AIEVAMPIGL YTSYEVTAPC GLCSPDGIIG
LLDVPNTFLD PERMKAGLIW FTRGYVEYQF PNNAKLSGSA IREIEIAMEL SSEVPGTSAD
WPSDITLSIN GTDVGTWTSP GDFGDKRGVY TPDWWKLKGS QYGKLKNWRI SSEGTFVDGV
KISSIDLNAI DLLAHHSIRV RIGVRDDARH PGGINIFGRG FGNYDQDIVL RIRTE