| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5656 |
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| Symbol | |
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| ID | 7381128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 680253 |
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| End bp | 681179 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643649222 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547459 |
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| Protein GI | 222106668 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.423786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATA GCGCACTTGG CCTCTGGGGC GTGCCGCTGG CGATATTGGC GGGAGCCATC
CGGGTCTCCA CCCCCTTCAT CTTCGTCAGC CTCGGCGAAA CCCTGACGGA ACGATCAGGC
CGCATCAATC TCGGTCTTGA AGGCACATTG GTGTTCGGTG CCATGGCCGC CTATGCCGTG
GCGGTCATGA CCGGTTCGCC CTGGGCTGGC GTCGCGGCTG CCATGGTGGC CGGATCGCTG
TTTGGCCTGC TGCATGGCTT TATCTGCAAA TTTCCGAAGG TCAACGATAT CGCCATCGGC
ATTGCGATGA TGCAGTTCGG GCTGGGCCTC GCCTTCTTCT TCGGCAAGCC GTTCATCCAG
CCGGTCGCGC CGAAACTGCC GGTCATTTCC CTCGGCTTCT GGTCACACCT CCCACAGATC
CAGGCGGCTT TGACCATCAA CATCCTGTTC GTCATCGGCC TTGTGCTAGC ACTTGTGCTC
TGGTGGGCGC TGAAGAATAC CCGGATCGGC CTGATCCTGC GGGTGGTCGG CGACAGTTCG
GATGCGGCGC GTGCCATGGG CATCAACCCG GACACCGTGC GCCTGCTGGC AACCATGGCA
GGCGGGGCGT TGGCGGCGGT GGGTGGTGCC TATCTGTCGC TGTTTTATCC CGGCTCCTGG
AACGAGCGGA TTTCGTCTGG CCAAGGCCTG ATGGCCGTGG CGCTGGTGAT TTTCGCCCGC
TGGAACCCCC TCGGTTGCGT GCTGGCGTCC CTGCTGTTTG GCGGGGCTGG TGCGCTCGGC
CCGGCGCTGC AATCCGTCGG CGTTAGCGAG GGCTATTATC TGTTTTACGC CGCACCCTAT
GTGCTGACCC TGATCATTCT CATCATCACA TCGTCACCGA CACGGGCGCT GTCCGGCGCT
CCGGCGGCGC TTTCCTTGAC GAAATAA
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| Protein sequence | MDDSALGLWG VPLAILAGAI RVSTPFIFVS LGETLTERSG RINLGLEGTL VFGAMAAYAV
AVMTGSPWAG VAAAMVAGSL FGLLHGFICK FPKVNDIAIG IAMMQFGLGL AFFFGKPFIQ
PVAPKLPVIS LGFWSHLPQI QAALTINILF VIGLVLALVL WWALKNTRIG LILRVVGDSS
DAARAMGINP DTVRLLATMA GGALAAVGGA YLSLFYPGSW NERISSGQGL MAVALVIFAR
WNPLGCVLAS LLFGGAGALG PALQSVGVSE GYYLFYAAPY VLTLIILIIT SSPTRALSGA
PAALSLTK
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