Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5651 |
Symbol | |
ID | 7381123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 675261 |
End bp | 675932 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649217 |
Product | hypothetical protein |
Protein accession | YP_002547454 |
Protein GI | 222106663 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.101784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTGG ATATCAAGGC CCAACCCTTC GCCTTCCCTT TGAAGCTGGA CCAGGCGGCG CTTATTGTTA TCGACATGCA GCGCGATTTC ACCGAGCCGG GCGGCTTTGG CGAAACACTT GGCAATGATG TCAGCCTCGT CAGCGCCATC GTGCCGGATG TGAAACGCTT GCTGGAGGCG GCCCGCGCCC ACGGTCTTAC CGTGATCCAC ACGATGGAAT GCCACAGGCC CGATCTCTCC GACCTGCCGG ATGCCAAGCG CAATCGCGGC AATCCTACCC TGCGGATCGG TGATCCCGGA CCGATGGGCC GCATCCTGAT TTCAGGGGAA TACGGCACCG GCATTCTGCC GGAGCTAGCG CCTGTTGACG GCGAGTTGGT GATCGAAAAG CCCGGCAAGG GTGCGTTCTA TGCTACCACT CTCGGTGAAG AGCTTACAGC GCGCGGCATT ACCCAGTTGA TCTTTGCCGG TGTCACCACC GAGGTCTGCG TGCAGACCAC GATGCGCGAA GCCAATGACC GGGGCTATGA CTGCCTGCTG ATTGAAGAAG CCACCGCCAG CTATTTTCCG GCCTTCAAGC AATCAACCCT GGAGATGATC CGCGCCCAGG GCGGCATTGT CGGCTGGACC GCCCATCTCG ACCCCTTTCT GGAGGCGCTT GCCCATGGCT GA
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Protein sequence | MMVDIKAQPF AFPLKLDQAA LIVIDMQRDF TEPGGFGETL GNDVSLVSAI VPDVKRLLEA ARAHGLTVIH TMECHRPDLS DLPDAKRNRG NPTLRIGDPG PMGRILISGE YGTGILPELA PVDGELVIEK PGKGAFYATT LGEELTARGI TQLIFAGVTT EVCVQTTMRE ANDRGYDCLL IEEATASYFP AFKQSTLEMI RAQGGIVGWT AHLDPFLEAL AHG
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