| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5595 |
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| Symbol | |
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| ID | 7381075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 606008 |
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| End bp | 607051 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649169 |
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| Product | zinc-binding oxidoreductase |
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| Protein accession | YP_002547406 |
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| Protein GI | 222106615 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGGA TTGCCGCACA GTATAGCGAA AAACCGGATA CCGATGAGAT GAAGGCAGCG
GTTTTCACCG GGCCGGGACA GATCAACATC GTATCCAATA CTCTGCCGCA ACCCGGACGG
AGCCAAGTAC GAATCAGGCT GGAGGGCTGT GGTGTCCTCG CTTGCGACCC TCTCTCTCTC
GATAGACAAG GGCGGATGCC GACCTCTGCC GAGCCTGTAG GATTGGATGG CGAAGGATGG
GGCGTCATCG ACGCCATTGG TCCCAATGTC AGAAGCCTGT CGGTCGGAGA CCGGGTGGCG
TCCCTTGTGC GGTCCGCTTA TGCCAGCCAC CATCTGGCCG ATGCAGACAG TGTCATTTCG
CTTCCCCCAT TGCTGGATGG CATGCCGTTT CCAGGCAGGT CCCTGAGCCG AGCGATGAAC
ATCTTTCGCC GTGGCGATAT CAAAGCCGGA CAAAGGGTGG CCATTATCGG CATAGACTTT
GTCGGCGCCC TTCTCGTCCA GCTCGCCTCA AGAGCCAAGG CGCATGTTAC AGCCATTTCG
CGCCGTCCAG CATCCTTGGC GGTGGCCAAG CGTATGGGAG CGGCAAAGGC GTTTACCATA
GACGAGCATG GTGCGGCGGA CGATTCCGTG CGGATCATCG AAACCGTGCA TGAGCTTACG
GGCGGATATC TTTGCGACCG GGTAATCGAC GTTACCGGCG AGAGCGGGCT GATTGATCTG
GCGGATAAAT TGACCAACGC GGCAGGTCGC CTGATCATGG CCGGTCGCCA ACAGTCCGAC
CCGCGCGAAG GAATTATACA GTCATGGAAA AAGCGCGAAG CCGCAGTAAT CCAGACAGAT
AAACACAGTC ACGGAATCGG CCCAGACATC AGCCAGGAAA TCTGCGTCGA TGGCATGCTT
GAAGCGGTGG CGGCAATCAT GGACGGACGG CTCGATCCCA CATCCCTTTA TACCCATCGC
TACCGATTGG AGGAGTTGGG TCAGGCGCTG ATCGCCGCCC GCGACCAGCC GGATGGATTT
ATGAAAGCAC TGGTGATCTA TTGA
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| Protein sequence | MDRIAAQYSE KPDTDEMKAA VFTGPGQINI VSNTLPQPGR SQVRIRLEGC GVLACDPLSL
DRQGRMPTSA EPVGLDGEGW GVIDAIGPNV RSLSVGDRVA SLVRSAYASH HLADADSVIS
LPPLLDGMPF PGRSLSRAMN IFRRGDIKAG QRVAIIGIDF VGALLVQLAS RAKAHVTAIS
RRPASLAVAK RMGAAKAFTI DEHGAADDSV RIIETVHELT GGYLCDRVID VTGESGLIDL
ADKLTNAAGR LIMAGRQQSD PREGIIQSWK KREAAVIQTD KHSHGIGPDI SQEICVDGML
EAVAAIMDGR LDPTSLYTHR YRLEELGQAL IAARDQPDGF MKALVIY
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