| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5579 |
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| Symbol | |
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| ID | 7381483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 589337 |
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| End bp | 590602 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649155 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547392 |
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| Protein GI | 222106601 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTCA TACGCAAGAG ACGCTTTGCT CTGGTCGGCG CCGGCCATCG GGGAACGACC
ATGTGGGGCC GCGACATTGT CGAGCGCTGG GGCGACCAGG TCGAGCTGGT GGCAATCTGC
GACCTGAACG GATTGCGCGC CGAACAATCG CAAGCCCATA TCGGCTCCTC GGTGCCGATC
TACCTGGATT TCGACCAGAT GCTGGCCGTT GAAAAGCCGG ATCTGGTGAT TGTCTGTACC
CGTGACAGCA CCCATGACGA GTTGATCGTC AAGGCAATGG AGGCGGGTGC CGACGTGATC
AGCGAAAAGC CGATGACCAC CACCGCAGCC AAGATCAAGC GCATTCTGAA AGCCGAAAAG
CGCACCGGGA GGCGGCTGGA CGTCTCCTTC AACTATCGTT TTGCGCCGAC CGCTGCCCGC
ATCAAGGAAT TGCTGAATTC AGGCGTCATC GGCGATGTCA CCTCCGTCGA TTTTCATTGG
TATCTCAACA CCAGTCACGG TGCGGACTAT TTCCGCCGCT GGCATGCCTA TACCGAAAAT
TCCGGCAGCC TGTTTGTCCA CAAGGCCACC CACCATTTCG ATCTATTGAA CTGGTATCTT
GATTCGGACC CGGATCTGGT CTCCGCCTTT GCCGACCTGA AGCATTACGG GCGCAATGGG
CCGTTTCGAG GCGAGCGCTG TCGCACCTGT CCCCATGCGC AGCAATGCGA TCATTATTTC
GATATGCGCA AGGAGCCTTT GCTGGAAGCG CTTTACGAAG CGCCATCCAA ACAAGATGGC
TATGTCCGCG ATGCCTGCGT ATACCGGGAG GATATCGACA TTCCCGACAC CATGGTCACC
AATATCCGCT ACAAGAACGG TGTCCATGTC TCCTATTCGC TGAATACCTA TATGCCGATT
GAGGGCCACC ATATTGCCTT CAATGGCCAC AAGGGGCGTA TCGAGCTTCG CCAATATGAA
AAACAGCACT GGACCGAGCC GCCAGCCGAT GAAATCGTGC TGATGCGCAA TTTCGGCGAG
GTCGAGCGCA TCTGGGTGCC GCATTCCTCC GGCGGCCATT ACGGCGGCGA TGACCGGCTG
CGCAATATGC TGCTAAAGCC CGGCATGAAT GACGAATTGC GCCAGCGCGC TGGCGCAAGG
GCTGGGGCCA TGTCGGTTCT GTGCGGGATT GCCGCGCTGG AAAGCAGCCG CAGCGGCAAA
CCCGTCACTA TTGCCGATGT CTGGGGTGAG GATGAAGGGA TCGGCCTTCT GGAGCAGATG
ACTTAA
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| Protein sequence | MQVIRKRRFA LVGAGHRGTT MWGRDIVERW GDQVELVAIC DLNGLRAEQS QAHIGSSVPI
YLDFDQMLAV EKPDLVIVCT RDSTHDELIV KAMEAGADVI SEKPMTTTAA KIKRILKAEK
RTGRRLDVSF NYRFAPTAAR IKELLNSGVI GDVTSVDFHW YLNTSHGADY FRRWHAYTEN
SGSLFVHKAT HHFDLLNWYL DSDPDLVSAF ADLKHYGRNG PFRGERCRTC PHAQQCDHYF
DMRKEPLLEA LYEAPSKQDG YVRDACVYRE DIDIPDTMVT NIRYKNGVHV SYSLNTYMPI
EGHHIAFNGH KGRIELRQYE KQHWTEPPAD EIVLMRNFGE VERIWVPHSS GGHYGGDDRL
RNMLLKPGMN DELRQRAGAR AGAMSVLCGI AALESSRSGK PVTIADVWGE DEGIGLLEQM
T
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