| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5578 |
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| Symbol | |
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| ID | 7381482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 586203 |
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| End bp | 589271 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649154 |
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| Product | alpha-mannosidase |
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| Protein accession | YP_002547391 |
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| Protein GI | 222106600 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA TACGAAAGCT CGATAGCCTG CTCGCCCGAT TGGCCGATCT TATCTTTCAA
CCCATCGGTG TTTCGGTGCC GCTGCGGTTT CGGGCGGCAC ATTATGACGA GCGTGCAAGC
GTGCTGAGCG AAAGCCGCGA GCACTGGGTG GCAGTGACGC CTGACCATAT CTGGGGCGAA
CCGGATGGCT ATTACTGGTT CGGCGGTAAC GCCACCCTGC CCCAGGGCGT GGATGGGCAG
CGGATCGTCG GACGCATTGA GGCGGCGTTT GGCAATGTCA TGGGCCGTAG CGATCCGCAA
TGCCTGGTGC GGATCGATGG AACGATCACC CAGGGCGGCG ATGCCAACCA CCGTGAATTC
CTACTGACAC CGTCTGCCCA AGCTGGCCAG AGTTTCGATA TCCAGATCGA AGCGGGGACG
ATCGAGGATC GGCGGCAGCT CGGCTTTGCC GTCAGCCTGC ATCACCATGA CCTGGAGGTT
GAGGAGGCCT ATTACGACAT TCGCGTGCCG CTGGACGTGG CCCGTCTGCT GGCAGAGGAC
GATCCACGCC GCCATTTCAT TCTCCGTACA CTGGATGATG CCATCAACGC CGTGGATTTT
CGAAAGGGCA ATGAGAACAG GTTCAAGGCC TCGCTTGCCA CAGCGCGCAC TATCACGGCG
GCCATCTACA ATGCCGTTGA TTTTGAGGAA AAGCCGGTCG TGATGGCAAC CGGCCACACC
CATATCGATG TCGCCTGGCT TTGGCGGGTG CGCGAAACCC GGCAGAAGAT GGCGCGATCC
ATGGCAACCG CCCTTGCCCT GATGGAGGAG TTTCCCGACT ACCGGTTCAT GTATAACCAA
TGCGTGCTGC TGGACTATCT GGCTGACGAC TATCCGCAAT TGTTCGAGCG TATCCGCGCC
CATGTGACGA CCGGTCGGTT TGAAATCGAA GGGGCACTAT GGCTGGAGCC GGACGTTAAT
ATCGCTGGTG GCGAGGCGCT GGTGCGCCAT ATCCTCTATG GCGTCGCCTA TCATCGCAAG
ACCTTTGGTG TCGAGCCGCG CATGGTCTGG TTGCCGGACA CATTCGGCTA TTCAGCGGCG
CTGCCGCAAT TGATGCGCAA ATCCGGCCTT GACAGTTTCG TCACCCATAA ACTGTCCTGG
AACGACACCA ACCGGATGCC TGACGACAAG CTGTTCTGGC AGGGTATCGA TGGCAGCAAG
GTGGTCGCCT ATTTCCTGAC CACCCAACCC TATGATTCCA AGCTGATCAA CACCACCTAC
TGCCCCAACC TGAAGCCGAC CCATGTGATG GGAACCTGGA AACGCCACGG CCAGCAGCGG
CTGGGTAAGG AACTGTTCCT GGTCTATGGC CATGGCGATG GCGGCGGCGG CCCAACCCGC
GAAATGCTCC AGAATATCCG CCGGATGGAA CGAGGCATAC CCGGTTGCCC GAAGGTCGAA
CACGGGCAAA TGCGGCCCTT CTTTGAGCGG CTGATTGCCG AGATGCAGGC CAATCCAGAC
AGCTATCCGA CCTGGGTCGG CGAGCTTTAC CTGGAATTCC ATCGCGGTAC GCTGACCTCC
GTCGCCAAGA ACAAGCGCTT CAACCGCAAA GCCGAAATCG CGCTTCGGGA GTTGGAGACG
CTGGCGGTGA TGGCGGAGCG GCAGGCAGGC CATGCCTATC CCACACAGCA ATTGCGCGAC
CTTTGGGACA TTATCATGCT CAACCAGTTC CACGATATAT TGCCGGGATC ATCGATTGGC
GCTGTCTATG AAGACAGTGA CCGTGATTAC GCCAGGCTAT TTACTGAGGC GGAAGCCTTG
CGAGCCGAAC TCATGGCGCT ATTGCCAACC CATGGCGGCG ATGTCGTCTT GAATGTGACC
GGTCGCCACC GGGCCGGTCT AGCTCTGACC CATGAACCTC ATGCCTCGGG TCAGACCCTG
GTTCTGGCGG ATGGATCGAA AACCCACGCC GTCCGGTTGG AAAACGTGCC GCCGCTGTCC
TTGTCCGCCG TCCTGCCCTG CGGCCCGACA CCGCCCGGTG CCGTTGAGGT TGAACCATTT
CGGCTTGCCA ACCGCTTTCT GGATGTGGTG TTCGACCCCA AAGGTCGCAT CCTGTCACTA
CATGACAAGG TGCGAGACCG CCATGTCTTG AAGCCCGGCC ACACCGCCAA TCGCCTCCAG
GCCTTCCGGG ACATGCCCGC AGAATATGAT GCCTGGGATA TCGATAGCGA TTTCGAAGAC
CAGATTTTCG AGATCGACGA TCTCGTCAGC GCCGAGATTG TCGAAACCGG GCCTTTGCGC
GCCGCAATCC GGTTCGAATG GCGCTATGAG GCCTCGCGGA TCGTCCAGGT CGTCTCTCTT
GAGGCCGCCA GCAGGAAGCT GGAATTCGAT ACGTTCATCG ACTGGCATGA GCACAATACG
CTGGTCAAAA CCGGCTTCCC GATGGCGCTC AACACCGCGT CAATTGATGC GGAAATCCAG
TTCGGTCATG TTCGCCGCGC CACGCACCGC AACACCTCCT GGGACCGCGC CCGGTTCGAA
TGCTCCATGC AGCGCTGGAT CGATGTGAGC GAACCGGATT TCGGCATCGC CTTCCTCAAC
GATTGCAAAT ATGGCTATGA CGCAAAGGGC AGCGATATTC GCCTCACCCT GCTGCGCTCA
CCGACCTATC CATGGCCGGA TGCCGACCAG GGCGAACATC GCCTGCGCTA CGCCTTGCTG
CTGCATGACG GCGACAAGGC CGTGGTGCAT GATGCCGCCG AGGATTTCAA CATGCCTTTG
CAGATCGTTG CGACCGGAAA GGCTAATGTT GTATCAGGAG ATCAAGCTCC GCCACTACTG
TCGATAGAAA CAGATGGCAT TACGCTGGAG GCGGTGAAAC AAGCCGAGGC GGGCGATGGC
TATATCTTAC GCCTCTGGGA AACCACCGGA AGCCAGCGTC ACGCGCGGAT TAAACTCGAC
AACGGGATCA CCCATGCCGC CCTCGTCGAT CTGCTTGAGG AAAATCCGGT GGCGGTAGAC
ATTAACGAAA AAGGGCTGGA TCTTGCCTTC CAGCCCTTCG AAATTCTGAC GCTGAAACTC
TACAGATAG
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| Protein sequence | MKTIRKLDSL LARLADLIFQ PIGVSVPLRF RAAHYDERAS VLSESREHWV AVTPDHIWGE
PDGYYWFGGN ATLPQGVDGQ RIVGRIEAAF GNVMGRSDPQ CLVRIDGTIT QGGDANHREF
LLTPSAQAGQ SFDIQIEAGT IEDRRQLGFA VSLHHHDLEV EEAYYDIRVP LDVARLLAED
DPRRHFILRT LDDAINAVDF RKGNENRFKA SLATARTITA AIYNAVDFEE KPVVMATGHT
HIDVAWLWRV RETRQKMARS MATALALMEE FPDYRFMYNQ CVLLDYLADD YPQLFERIRA
HVTTGRFEIE GALWLEPDVN IAGGEALVRH ILYGVAYHRK TFGVEPRMVW LPDTFGYSAA
LPQLMRKSGL DSFVTHKLSW NDTNRMPDDK LFWQGIDGSK VVAYFLTTQP YDSKLINTTY
CPNLKPTHVM GTWKRHGQQR LGKELFLVYG HGDGGGGPTR EMLQNIRRME RGIPGCPKVE
HGQMRPFFER LIAEMQANPD SYPTWVGELY LEFHRGTLTS VAKNKRFNRK AEIALRELET
LAVMAERQAG HAYPTQQLRD LWDIIMLNQF HDILPGSSIG AVYEDSDRDY ARLFTEAEAL
RAELMALLPT HGGDVVLNVT GRHRAGLALT HEPHASGQTL VLADGSKTHA VRLENVPPLS
LSAVLPCGPT PPGAVEVEPF RLANRFLDVV FDPKGRILSL HDKVRDRHVL KPGHTANRLQ
AFRDMPAEYD AWDIDSDFED QIFEIDDLVS AEIVETGPLR AAIRFEWRYE ASRIVQVVSL
EAASRKLEFD TFIDWHEHNT LVKTGFPMAL NTASIDAEIQ FGHVRRATHR NTSWDRARFE
CSMQRWIDVS EPDFGIAFLN DCKYGYDAKG SDIRLTLLRS PTYPWPDADQ GEHRLRYALL
LHDGDKAVVH DAAEDFNMPL QIVATGKANV VSGDQAPPLL SIETDGITLE AVKQAEAGDG
YILRLWETTG SQRHARIKLD NGITHAALVD LLEENPVAVD INEKGLDLAF QPFEILTLKL
YR
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