| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5562 |
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| Symbol | |
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| ID | 7381470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 567832 |
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| End bp | 568251 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649142 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002547379 |
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| Protein GI | 222106588 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.21316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTG CAATTGGCGA GGCGGCGCGG ATCAGTGGCG TCAAGGTTGC GACGATCCGG
TATTACGAAC AGGTCGGCCT CGTGCCGCAG CCGCCGCGCA CCGATGGAAA CCGCAGGCTT
TACAGCGCGG CTCATTTGCA GAGGCTAACC TTCATCCGCC ATGCCCGCGA GCTTGGCTTC
GAGGTCGATG CCATTCGCAC CCTGCTTGAT CTTCAGGATA AGCCCGGTCA ATCCTGCTCA
CCGGCTGATT CGATTGCAAG ACAACGGCTT GCCGATGTCG AGGAACGGAT CGACCGGCTC
AGGGCGTTGA AAACCGAGTT GGAGCGAATG ATCACCGGCT GTTCGCATGG GACGATTGCC
GAATGCCGGG TCATCGAGGT GCTGGCCGAT CACGACCAAT GCCGCCACGA CCGGCACTGA
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| Protein sequence | MNIAIGEAAR ISGVKVATIR YYEQVGLVPQ PPRTDGNRRL YSAAHLQRLT FIRHARELGF
EVDAIRTLLD LQDKPGQSCS PADSIARQRL ADVEERIDRL RALKTELERM ITGCSHGTIA
ECRVIEVLAD HDQCRHDRH
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