| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5548 |
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| Symbol | |
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| ID | 7381457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 546277 |
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| End bp | 547398 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649129 |
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| Product | oxidoreductase |
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| Protein accession | YP_002547366 |
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| Protein GI | 222106575 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAAA ACAAGATATC AAGCGCTGTC ATTATCGGCG GCGGCATTTT TGGAACGTCC
ACGGCGGTGC AGCTTGTCCG CAAGGGTATC AATGTCACCC TGATCAATGA CGGACCGGTT
GCCAATGGCG CGTCCGGGCG TTCCCTGTCC TGGCTCAATT CCTCGCGGAT GCGCTCTGAT
GCTTATCATC GCCTGCGGAT GGCGGGCATT GATCGTTACC GCACACTTGC TGAGCGCTTT
CCAGGGGCCG ATTGGCTGTC CTTCAAGGGT GGACTGACCT GGGATGCCGA CGACGCCAAC
AATGAGATTG ATGCCGCCTA TGACCATGAG GTCAAGCTCG CCTATGATGC CGTTCATCTG
GCCGCAGACG AGGTCAAGGC TGTGACGCCT GGCGTCGATG CGGACGTGGT CACACCACAG
GGCGCTATTT TCAACGCGGC CGAGGGTTGG GTAGATTTGC CCGCCCTGAT CAAAATTCTC
GTCGATGAAT TTAAGGAGCG CGGCGGCACG CTGGTGACAG ATGCCGGGGT GGCCAGCGTG
ATAATTGAAA ACGGTCGCGC CGTTGGTGCT CGCGCAGCAA ACGGTGCGAC CTATCCTGCC
GATGCGGTCC TAGTGGCAAC GGGACCGTCC GTTCCCAAAA TGGCCGCTGA TGCAGGCCAG
AAAATTGACG ACGGCACCCC GATTTCGCTG TTGGTCACAA CAAAGCCTCT CGACCTTCCC
TTGACAGCCG TGCTGAACAC ACCCCGCATC GCTATTCGCC CCGGCCCCAA CAACAGTTTT
GCATTGGATT CGGCATGGTC CGAGGAAGAA GTCGGTACTT TGGCGGATGG CAGCTATCAG
GTGAAGCAGG AAACGCTGGA TGGCCTGTTG ACGGAAGCCT CCAAGGTACT GGAAGGCAAT
CCGAAGCTCG AACTGGCCAG CTATGGCGTC GGCCGCAAAC CCATTCCCGG CGATGGTGAA
CCTGTTCTGG GCGAACTCAA AGCCATCCCC GGCTATTTTG TTGCCTTCAG CCATAGCGGC
GCAACGCTGG GCCTGATTGT CGGCGAACTT CTCGCCTATG AAATCGCCAG TGGCGAACGC
CATCCGATGT TGGCCACGTT CCGGCCTGAG CGCTTCGCCT GA
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| Protein sequence | MSKNKISSAV IIGGGIFGTS TAVQLVRKGI NVTLINDGPV ANGASGRSLS WLNSSRMRSD
AYHRLRMAGI DRYRTLAERF PGADWLSFKG GLTWDADDAN NEIDAAYDHE VKLAYDAVHL
AADEVKAVTP GVDADVVTPQ GAIFNAAEGW VDLPALIKIL VDEFKERGGT LVTDAGVASV
IIENGRAVGA RAANGATYPA DAVLVATGPS VPKMAADAGQ KIDDGTPISL LVTTKPLDLP
LTAVLNTPRI AIRPGPNNSF ALDSAWSEEE VGTLADGSYQ VKQETLDGLL TEASKVLEGN
PKLELASYGV GRKPIPGDGE PVLGELKAIP GYFVAFSHSG ATLGLIVGEL LAYEIASGER
HPMLATFRPE RFA
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