| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5547 |
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| Symbol | galE |
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| ID | 7381456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 545185 |
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| End bp | 546078 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649128 |
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| Product | UDP-glucose 4-epimerase |
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| Protein accession | YP_002547365 |
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| Protein GI | 222106574 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC GTATCGTCTT TACGGGCGGC ACCGGCAAGG CTGGACGCCA TGCCGTTCCG
CATCTGCAAG CCAAGGGATA TTCGATCCTC AACCTTGATC TGAAGCCGCT CGACTGCCCT
GGCGTCAATA CGCTGATCAC TGATATCACC GATAGCGGCC AGGTGTTCAA CGCGCTGACG
ACGCATTTCG GTTTTGATGG ATATGATCAC GGCGCCCCGC CTTCGGCGCC CGACGCCGTC
GTGCATTTCG CTGCCATTCC CCGGGTGATG ATCGAGCCTG ACAATTCCAC CTTTTCGGCC
AATGTCGTCG GCACCTATAA TGTCATCGAG GCGGCCATGA AGCTTGGGGT GCGCAAGGTG
ATCATCGCTT CGAGCGAAAC CACCTATGGC GTCTGTTTTG CCGAAGGCGA CAAGGAGTTC
CATAGTTTTC CGCTTGAAGA AGACTATGAC AGCGACCCGA TGGACAGCTA CGGTCTGTCC
AAGGTGGTCA ATGAAAAGAC CGCCCGGGCC TTTGCCATGC GCTACAAGGC CGATATCTAT
GCGCTGCGGA TTGGCAATGT GATCGAGCCG CATGACTATG CCAATTTCCC TGGCTATCTC
GATAACCCCA TGTCGCGCAA GCGCAATGCC TGGAGCTATA TCGACGCCCG CGACCTCGGC
GAAATCGTCC ATTTGTGCAT CGAAAAGGAC GGCCTCGGTT TCCAGGTGTT CAATGCCGTC
AACGACACGA TCACCGCCGA TCTGCCGACC CGTGAATTTC TTGCCAAATA TTGCCCCGAC
ACGCCGGTTC TACGGGAGAT GGGTGAGAAT GAGGCACCAA TTTCCAACCG GAAGGCCCGC
CAGGTGCTTG GTTTTAAGGA AGAGCATCCC TGGCGCAAAT ATGTGACGCG CTGA
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| Protein sequence | MNKRIVFTGG TGKAGRHAVP HLQAKGYSIL NLDLKPLDCP GVNTLITDIT DSGQVFNALT
THFGFDGYDH GAPPSAPDAV VHFAAIPRVM IEPDNSTFSA NVVGTYNVIE AAMKLGVRKV
IIASSETTYG VCFAEGDKEF HSFPLEEDYD SDPMDSYGLS KVVNEKTARA FAMRYKADIY
ALRIGNVIEP HDYANFPGYL DNPMSRKRNA WSYIDARDLG EIVHLCIEKD GLGFQVFNAV
NDTITADLPT REFLAKYCPD TPVLREMGEN EAPISNRKAR QVLGFKEEHP WRKYVTR
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