| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5527 |
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| Symbol | |
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| ID | 7381442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 523647 |
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| End bp | 524528 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649114 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547351 |
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| Protein GI | 222106560 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.889225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCT TTGCCTATTC GAAATGGGAT AGTGTGTCTG TCGCAGCAGC ATTGCTGCAT
CTGGCCTTCA ATATCTATCT GATCGCCGGG TTCGAGAGCC GGCCGCTGTG GCTCTCCTTC
GTGCTTGCCT GTATTTATGC GCTGTCGATT TCCTGGAACA TCAATAGCAT TTCCCATAAC
TTCATCCACA CGCCTTATTT CAAGCCGCGC TGGATGAATT ATGCCTTCAG CCTGCTGGAA
TCGATCACCA TTGGCTTTTC TCAGACCTAT TATCACTGGG TCCATATGCG CCACCATTCC
GGCAATAGCG ACCGGCCGGA TGAGAGCGGC AAGACCGTCG ATCTGCTGTC GATCTACAAG
CATGGCAAGA ATGGCGAGCC GGAAAATGTG TTTTCCTACA CCTTTCTGAG CTTCTTCCGG
GATGATCTGG GCGAAATCCA TCGGGCTATC GCTGCCAAGC GGCCATTTGA AGCCAAGTGG
GGGCGGATCG AACTGATCGC CTTCATTGTC GTCGCGCTGG CGGCCCTGGC CTATGACTGG
AAGGCGACGC TGTTCCTCGT GCCCTTCTAT TATCTCGGCA ATTGCCTGTC GTCTCTCAAT
GGTTACTACG AGCATCTGCA CGGCGACCCG GACGAGCCGA TTGCCTGGGG CGTCAGCAGT
TACAAGAGCT TCTACAACTG GCTGTGGTTC GGCAATGGCT ATCACGCCGA ACATCATTAC
CGGCCCAAAA CCCACTGGAC GCAATTGCCG CTGCTGCATG ACCGGATCAA GGATGAGCAG
GAAAAGGCCG GAACCCATGT GATCAGCACC TGCCACGCGC TCGGCTTCAT TGCCAAGGAG
AACCTGGCCA AAGAGACCTT GTCGGGGGAG GGTACCCGAT GA
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| Protein sequence | MKLFAYSKWD SVSVAAALLH LAFNIYLIAG FESRPLWLSF VLACIYALSI SWNINSISHN
FIHTPYFKPR WMNYAFSLLE SITIGFSQTY YHWVHMRHHS GNSDRPDESG KTVDLLSIYK
HGKNGEPENV FSYTFLSFFR DDLGEIHRAI AAKRPFEAKW GRIELIAFIV VALAALAYDW
KATLFLVPFY YLGNCLSSLN GYYEHLHGDP DEPIAWGVSS YKSFYNWLWF GNGYHAEHHY
RPKTHWTQLP LLHDRIKDEQ EKAGTHVIST CHALGFIAKE NLAKETLSGE GTR
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