| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5524 |
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| Symbol | |
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| ID | 7381439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 520930 |
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| End bp | 522342 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649111 |
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| Product | 4 animobutyrate aminotransferase |
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| Protein accession | YP_002547348 |
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| Protein GI | 222106557 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.753425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCAA CGCTCAAGAT TGCCGAACCG CCCGTCGTCT CGCCTTCAGA AGACGAGTTG
AGAGAACTCG AAAACCTCTA TTGTTCTCAC GGCGACACCG TTCACTATAC GGATAAGCCG
AAATTCTTCG AAGGTTGTGA AGGCTCGTTC GTCTACGATG CCAGCCAGAC GCCGTTTCTC
GACCTGCAAA TGTGGTATTC CGCCGTCAAT TTCGGCTATC GCAACGAGCG GCTGAACAAT
GCGGCCCATC GGCAGCTCGA TCAGCTTCCG CAGGTGGCAT CCCAATATCT GCACCGCGAA
AAAGTCGAAC TGGCCGCACT GATTGCCCGC GATGCCGAGC AGAAGTTTGG CCATAAGGGC
CGGGTGCATT TCAATGTCGG CGGCTCCCAG GCTGTCGAGG ATTCGCTGAA GCTGGTGCGC
AATTTCACCG GTGGCAAAAG CCTGATGTTC GCTTTCGAGG GCGGTTATCA TGGCCGCACG
CTCGGCGCGA GCGCGATTAC CTCAAGCTAT CGCTACCGTC GCCGGTACGG CCATTTCAGC
GACCGTGCTC AGTTCATCGA GTTTCCCTAT CACTTCCGCG GCCCGAAAGG CATGTCGAAG
GAGGAATATG GTGAGGTCTG CGTACAGAAA TTCGCCCGCC TGTTTGAAAG CGAATATAAC
GGTGTCTGGG ATCCCAAGGC TGGTAAATCC GAATATGCCG CTTTCTATGT CGAGCCGATC
CAGGGCACCG GCGGCTACGT CATTCCGCCG ATGAATTTCT TCACCGGCTT GAAGAAAGTG
CTTGATGACC ACGGTATCCT GTTGGTCGTC GATGAAATCC AGATGGGCGT CTACCGCACC
GGCAAGCTTT GGTCGATCGA GCATTTCGGC GTGTCGCCTG ATGTTCTGGT ATTCGGCAAG
GCCATTACCA ATGGTCTCAA CCCGCTGTCC GGCATCTGGG CGCGCGAGGA AATGATCAAT
CCGACGATTT TCCCGCCCGG CTCGACCCAT TCGACCTTCG CCAGCAATCC AATGGGCACC
GCCGTTGCGC TGGAAACCAT GAAAATGGTC GGCGAGGGTG ATTTTGGCGC CAGCGTCATG
GAAAAAGGCG CCCGCTTCCT GGATGGTCTG AAGGTTCTCG AAAAGCGTCA TGCCATCGTC
GGAGATGTCG ATGGTCTCGG CCTCGCGCTC CGCATGGAAA TCTGCAAGGA AGACGGGTTT
ACCCCCGACA AGGCAACACT CGACTGGATG TCGGACGAGG GCATGAAGGG CGATATGGTT
GTTGATGGCA AGACCTATGG TCTGGTGCTC GATGTCGGCG GCTACCATAA GAACGTCATC
ACGCTGGCTC CCAACCTGAT GATCAGCAAC AGCGAAATCG ATCTGGCCCT CACCCTGCTC
GATCAGCTGC TGACCCGCGC TGCACGGAGA TAG
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| Protein sequence | MRATLKIAEP PVVSPSEDEL RELENLYCSH GDTVHYTDKP KFFEGCEGSF VYDASQTPFL
DLQMWYSAVN FGYRNERLNN AAHRQLDQLP QVASQYLHRE KVELAALIAR DAEQKFGHKG
RVHFNVGGSQ AVEDSLKLVR NFTGGKSLMF AFEGGYHGRT LGASAITSSY RYRRRYGHFS
DRAQFIEFPY HFRGPKGMSK EEYGEVCVQK FARLFESEYN GVWDPKAGKS EYAAFYVEPI
QGTGGYVIPP MNFFTGLKKV LDDHGILLVV DEIQMGVYRT GKLWSIEHFG VSPDVLVFGK
AITNGLNPLS GIWAREEMIN PTIFPPGSTH STFASNPMGT AVALETMKMV GEGDFGASVM
EKGARFLDGL KVLEKRHAIV GDVDGLGLAL RMEICKEDGF TPDKATLDWM SDEGMKGDMV
VDGKTYGLVL DVGGYHKNVI TLAPNLMISN SEIDLALTLL DQLLTRAARR
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